RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SMPDL3AQ92484 453 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 INPP5DQ92835 1189 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 ACAT2Q9BWD1 397 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 EPN3Q9H201 632 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 KLHL42Q9P2K6 505 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 SEC16AO15027 2179 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 ZNF839A8K0R7 811 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 K7EM74 188 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 VPS26AO75436 327 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 PSIP1O75475 530 aaKnown RBP19.26■□□□□ 0.67
LRCH3-208ENST00000443727 TTC4O95801 387 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 SYF2O95926 243 aaKnown RBP19.26■□□□□ 0.67
LRCH3-208ENST00000443727 RRADP55042 308 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 MPP1Q00013 466 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 DHX9Q08211 1270 aaKnown RBP19.26■□□□□ 0.67
LRCH3-208ENST00000443727 ATP1A4Q13733 1029 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 FASTKQ14296 549 aaKnown RBP19.26■□□□□ 0.67
LRCH3-208ENST00000443727 GRM7Q14831 915 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 CRYMQ14894 314 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 NAA25Q14CX7 972 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 BBS9Q3SYG4 887 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.26■□□□□ 0.67
LRCH3-208ENST00000443727 COLEC12Q5KU26 742 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 ZNF549Q6P9A3 640 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 NEK10Q6ZWH5 1172 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 SLCO2A1Q92959 643 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 RUNDC3BQ96NL0 473 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 GPR21Q99679 349 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 SLC30A3Q99726 388 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 NAPGQ99747 312 aaPredicted RBP19.26■□□□□ 0.67
LRCH3-208ENST00000443727 SAR1BQ9Y6B6 198 aa19.26■□□□□ 0.67
LRCH3-208ENST00000443727 A0A1B0GX78 115 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 MYO1CO00159 1063 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 KLF7O75840 302 aaPredicted RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 HAUS5O94927 633 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 ERVK-10P10266 1014 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 PIM1P11309 404 aaPredicted RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 ENO3P13929 434 aaPredicted RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 MCM3P25205 808 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 HSD17B2P37059 387 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 VSX2P58304 361 aaPredicted RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 DR1Q01658 176 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 SSPNQ14714 243 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 ARHGAP19Q14CB8 494 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 YOD1Q5VVQ6 348 aaPredicted RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 SUSD1Q6UWL2 747 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 SYDE1Q6ZW31 735 aaPredicted RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 MED25Q71SY5 747 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 TMEM102Q8N9M5 508 aaPredicted RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 OR2A1Q8NGT9 310 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 GIMAP7Q8NHV1 300 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 IP6K3Q96PC2 410 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 PKP4Q99569 1192 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 EBNA1BP2Q99848 306 aaKnown RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 NAT9Q9BTE0 207 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 PPANQ9NQ55 473 aaKnown RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 CUTCQ9NTM9 273 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 ABCF3Q9NUQ8 709 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 DHRS7Q9Y394 339 aa19.25■□□□□ 0.67
LRCH3-208ENST00000443727 SNRNP200O75643 2136 aaKnown RBP19.25■□□□□ 0.67
LRCH3-208ENST00000443727 A0A0J9YVX5 310 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 A0A1W2PPV9 198 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 A6NL46 340 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 PEX12O00623 359 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 ZBTB14O43829 449 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 SRPX2O60687 465 aaPredicted RBP19.24■□□□□ 0.67
LRCH3-208ENST00000443727 CTSVO60911 334 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 BANF1O75531 89 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 EIF2S1P05198 315 aaKnown RBP19.24■□□□□ 0.67
LRCH3-208ENST00000443727 MPC1LP0DKB6 136 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 PAFAH1B1P43034 410 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 PNLIPRP1P54315 467 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 FAM214AQ32MH5 1076 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 SPANXN3Q5MJ09 141 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 WASHC2DQ5SRD0 308 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 PAPD7Q5XG87 772 aaKnown RBP19.24■□□□□ 0.67
LRCH3-208ENST00000443727 UGT3A1Q6NUS8 523 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 PDIK1LQ8N165 341 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 OR2Y1Q8NGV0 311 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 PTERQ96BW5 349 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 AARSD1Q9BTE6 412 aaKnown RBP19.24■□□□□ 0.67
LRCH3-208ENST00000443727 DPH7Q9BTV6 452 aa19.24■□□□□ 0.67
LRCH3-208ENST00000443727 MRPS30Q9NP92 439 aaKnown RBP19.24■□□□□ 0.67
LRCH3-208ENST00000443727 TRMT6Q9UJA5 497 aaKnown RBP19.24■□□□□ 0.67
LRCH3-208ENST00000443727 PCDHGA9Q9Y5G4 932 aaKnown RBP19.24■□□□□ 0.67
LRCH3-208ENST00000443727 BSNQ9UPA5 3926 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 DSCR3O14972 297 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 CCNDBP1O95273 360 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 MORF4L2Q15014 288 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 MSS51Q4VC12 460 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 MRGPREQ86SM8 312 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 CREG2Q8IUH2 290 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 CPNE9Q8IYJ1 553 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 C2CD4AQ8NCU7 369 aaPredicted RBP19.23■□□□□ 0.67
LRCH3-208ENST00000443727 CD200R1Q8TD46 325 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 ASB11Q8WXH4 323 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 CFAP36Q96G28 342 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 NDNQ99608 321 aa19.23■□□□□ 0.67
LRCH3-208ENST00000443727 UTP6Q9NYH9 597 aaKnown RBP19.23■□□□□ 0.67
LRCH3-208ENST00000443727 MED16Q9Y2X0 877 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms