RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 SLC44A4Q53GD3 710 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 CES5AQ6NT32 575 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 NIPAL1Q6NVV3 410 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 MBOAT1Q6ZNC8 495 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 TMEM132CQ8N3T6 1108 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 HERVK_113Q902F9 699 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 ITCHQ96J02 903 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 ZNF347Q96SE7 839 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 RAD9AQ99638 391 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 BCL7BQ9BQE9 202 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 HTATIP2Q9BUP3 242 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 ZBP1Q9H171 429 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 DLGAP4Q9Y2H0 992 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 ZNF99A8MXY4 864 aaPredicted RBP15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 TLL1O43897 1013 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 LILRB3O75022 631 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 XYLBO75191 536 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 NDUFS2O75306 463 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 UGT2B11O75310 529 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 GABARAPO95166 117 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 CLDN9O95484 217 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 TRBC1P01850 177 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 BMP1P13497 986 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 S100A3P33764 101 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 HNRNPFP52597 415 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 ABHD18Q0P651 414 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 ACOX1Q15067 660 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 TRIM74Q86UV6 250 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 TRIM73Q86UV7 250 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 FAR1Q8WVX9 515 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 ALG14Q96F25 216 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 INPP5KQ9BT40 448 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 RMND5AQ9H871 391 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 PARVBQ9HBI1 364 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 EXD2Q9NVH0 621 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 CRLS1Q9UJA2 301 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 FBXO10Q9UK96 956 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 YIPF1Q9Y548 306 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 DGKBQ9Y6T7 804 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 GLYATL1P3A0A0U1RQE8 302 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 K7ERQ8 282 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 PRRG1O14668 218 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 UGT2B4P06133 528 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 PRPS2P11908 318 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 BPIP17213 487 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 IDUAP35475 653 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 CSKP41240 450 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 CCR3P51677 355 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 RAPSNQ13702 412 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 CHRNA6Q15825 494 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 TTLL9Q3SXZ7 439 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 CPZQ66K79 652 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 DCAF4L2Q8NA75 395 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 ZBTB8BQ8NAP8 495 aaPredicted RBP15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 SETD9Q8NE22 299 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 OR6K2Q8NGY2 324 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 CNIH3Q8TBE1 160 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 SH3YL1Q96HL8 342 aaPredicted RBP15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 TM6SF2Q9BZW4 377 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 LATS2Q9NRM7 1088 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 U3KQV3 271 aa15.96■□□□□ 0.15
CLCNKA-203ENST00000439316 KCNE1BA0A087WTH5 132 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 C2orf78A6NCI8 922 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 PTGES3LE9PB15 166 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 AXIN1O15169 862 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 MITFO75030 526 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 PDYNP01213 254 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CTSAP10619 480 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 MYCLP1P12525 358 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 PRPH2P23942 346 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 IGFBP5P24593 272 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CDKN2CP42773 168 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 EMX1Q04741 257 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 SFSWAPQ12872 951 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ARHGEF7Q14155 803 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ZNF846Q147U1 533 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 GPR33Q49SQ1 333 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 GGTA1PQ4G0N0 100 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CDKL4Q5MAI5 379 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 TTC23LQ6PF05 361 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ZNF551Q7Z340 670 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ZDHHC21Q8IVQ6 265 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 FAM9CQ8IZT9 166 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 NXPE1Q8N323 547 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 PIK3C3Q8NEB9 887 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 TESCQ96BS2 214 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 HHIPQ96QV1 700 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 INTS6Q9UL03 887 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 PPT2Q9UMR5 302 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CLDN25C9JDP6 229 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 XPNPEP2O43895 674 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CLDN7O95471 211 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 LATS1O95835 1130 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ANGPTL1O95841 491 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 GSNP06396 782 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 ANXA5P08758 320 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 CBSLP0DN79 551 aa15.95■□□□□ 0.14
CLCNKA-203ENST00000439316 JUNDP17535 347 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms