RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 COPS8Q99627 209 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 CGREF1Q99674 301 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 POLR1BQ9H9Y6 1135 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 ARL15Q9NXU5 204 aa13.52□□□□□ -0.25
PTCHD3-201ENST00000438700 C16orf96A6NNT2 1141 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 KPNA3O00505 521 aaPredicted RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 SEC22BO75396 215 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 OCM2P0CE71 109 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 OCMP0CE72 109 aaPredicted RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 ZNF30P17039 623 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 XPAP23025 273 aaPredicted RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 POLR2IP36954 125 aaKnown RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 RPIAP49247 311 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 BMXP51813 675 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 C21orf59P57076 290 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 INTS11Q5TA45 600 aaKnown RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 NCCRP1Q6ZVX7 275 aaPredicted RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 YAF2Q8IY57 180 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 CENPSQ8N2Z9 138 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 LIX1Q8N485 282 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 CPA6Q8N4T0 437 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 DTWD1Q8N5C7 304 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 DPP10Q8N608 796 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 TERB1Q8NA31 727 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 BIRC7Q96CA5 298 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 LRIG1Q96JA1 1093 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 COX4I2Q96KJ9 171 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 PPP3R2Q96LZ3 170 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 RNF145Q96MT1 663 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 PKD2L2Q9NZM6 624 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 VAPAQ9P0L0 249 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 FAM8A1Q9UBU6 413 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 RGS14O43566 566 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 DFNA5O60443 496 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 STK16O75716 305 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 JAK1P23458 1154 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 OPRD1P41143 372 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 METAP1P53582 386 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 RUNX3Q13761 415 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 BOP1Q14137 746 aaKnown RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 EIF4HQ15056 248 aaKnown RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 AASDHQ4L235 1098 aaPredicted RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 ATAT1Q5SQI0 421 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 ZDHHC20Q5W0Z9 365 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 GLYATQ6IB77 296 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 PARS2Q7L3T8 475 aaKnown RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 ZC3H7AQ8IWR0 971 aaKnown RBP13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 RGL4Q8IZJ4 473 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 PYCR2Q96C36 320 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 VPS50Q96JG6 964 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 MUC13Q9H3R2 512 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 TBC1D23Q9NUY8 699 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 ZDHHC3Q9NYG2 299 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 CLEC1BQ9P126 229 aa13.51□□□□□ -0.25
PTCHD3-201ENST00000438700 ANTXRLA6NF34 631 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 INHBBP09529 407 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 HTR1EP28566 365 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 MLLT10P55197 1068 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 GSTM4Q03013 218 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ZNF234Q14588 700 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 HNRNPA1L2Q32P51 320 aaKnown RBP13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 SPATS1Q496A3 300 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 SPANXN4Q5MJ08 99 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 Q6ZVL8 140 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC13A3Q8WWT9 602 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 SCAMP4Q969E2 229 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC35B4Q969S0 331 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 NSMCE2Q96MF7 247 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ACTR8Q9H981 624 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ZDHHC4Q9NPG8 344 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 KCTD5Q9NXV2 234 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 DKK3Q9UBP4 350 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 PDE10AQ9Y233 779 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 EIF3LQ9Y262 564 aaKnown RBP13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 NEUROG3Q9Y4Z2 214 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 UNC80Q8N2C7 3258 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 PLXNA2O75051 1894 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 TBC1D3BA6NDS4 549 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 TRIM64CA6NLI5 447 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ACOX3O15254 700 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 KCNH1O95259 989 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ANXA5P08758 320 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 PCNAP12004 261 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 MATN1P21941 496 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 MYF6P23409 242 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 NFKBIAP25963 317 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 AKT1P31749 480 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 GJA4P35212 333 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ETV3P41162 512 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 DLX2Q07687 328 aaPredicted RBP13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ATP6AP1Q15904 470 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ZNF829Q3KNS6 432 aaPredicted RBP13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 LDLRAP1Q5SW96 308 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 C9orf64Q5T6V5 341 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 ANKRD26P1Q6NSI1 321 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 C16orf87Q6PH81 154 aa13.5□□□□□ -0.25
PTCHD3-201ENST00000438700 PARM1Q6UWI2 310 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms