RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HNF4AP41235 474 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ERVPABLB-1P60509 514 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CES4AQ5XG92 561 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 MZT2AQ6P582 158 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PLET1Q6UQ28 207 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TMPRSS11AQ6ZMR5 421 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 FAM43BQ6ZT52 329 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CCDC149Q6ZUS6 474 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PLEKHM3Q6ZWE6 761 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 MTSS1LQ765P7 747 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CHST9Q7L1S5 443 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 SLC22A16Q86VW1 577 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 NPAS4Q8IUM7 802 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CDK20Q8IZL9 346 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 METTL25Q8N6Q8 603 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF614Q8N883 585 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 C3orf58Q8NDZ4 430 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 C9orf43Q8TAL5 461 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 HSH2DQ96JZ2 352 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 KCNC2Q96PR1 638 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TPT1P8Q9HAU6 139 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 FLRT1Q9NZU1 646 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 SEC14L3Q9UDX4 400 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ATP6V1HQ9UI12 483 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CFL2Q9Y281 166 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GPR45Q9Y5Y3 372 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 A0A096LPI6 279 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PSMD11O00231 422 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 HAT1O14929 419 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TNFRSF21O75509 655 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CYP7B1O75881 506 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CHRNA1P02708 482 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CBSLP0DN79 551 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 BCKDHAP12694 445 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ARSAP15289 507 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TNNI3P19429 210 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CBSP35520 551 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 RFX3P48380 749 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PNLIPRP1P54315 467 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GABARAPL2P60520 117 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CD47Q08722 323 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 DNASE1L3Q13609 305 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 BHLHB9Q6PI77 547 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 SERINC5Q86VE9 423 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 LGI4Q8N135 537 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 SCML4Q8N228 414 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 SLC15A4Q8N697 577 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 KRTCAP2Q8N6L1 136 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 VANGL1Q8TAA9 524 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ATOH8Q96SQ7 321 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 FAIM2Q9BWQ8 316 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 MOV10Q9HCE1 1003 aaKnown RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TRPS1Q9UHF7 1281 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 WASH4PA8MWX3 477 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 SLC1A7O00341 560 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 UGT2B17O75795 530 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PCDH8O95206 1070 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CLTBP09497 229 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PORP16435 677 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PRDX3P30048 256 aaKnown RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 DPP6P42658 865 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 NUDT6P53370 316 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 COX10Q12887 443 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GNA13Q14344 377 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 PON2Q15165 354 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 FBXO43Q4G163 708 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TPRG1LQ5T0D9 272 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 DCST1Q5T197 706 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ENPP6Q6UWR7 440 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GALNT7Q86SF2 657 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 LINC01465Q8N7H1 131 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TMCO6Q96DC7 493 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 CMTM7Q96FZ5 175 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 LHPPQ9H008 270 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 TMEM45AQ9NWC5 275 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 FAM120CQ9NX05 1096 aaKnown RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GMPR2Q9P2T1 348 aaKnown RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ERVK-18Q9QC07 812 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 EVPLQ92817 2033 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 M0QZQ0 153 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 WNT9AO14904 365 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PCDH7O60245 1069 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 XYLBO75191 536 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 ERAL1O75616 437 aaKnown RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 OPN1SWP03999 348 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SPATA31D3P0C874 917 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 BUD31P41223 144 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 BMXP51813 675 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 AFF1P51825 1210 aaKnown RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SCN1BQ07699 218 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SEMA3AQ14563 771 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 HKDC1Q2TB90 917 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 IQCCQ4KMZ1 466 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 RFTN2Q52LD8 501 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-205ENST00000438362 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 SPATA31D4Q6ZUB0 917 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 PELI3Q8N2H9 469 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 TEX47Q8TBZ9 253 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 XAGE5Q8WWM1 108 aa6.51□□□□□ -1.37
CSDE1-205ENST00000438362 NCSTNQ92542 709 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms