RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 LONP1P36776 959 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC26A3P40879 764 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 RPL5P46777 297 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 RARRES1P49788 294 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SEC24CP53992 1094 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 EIF3BP55884 814 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 P2RX3P56373 397 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 NUP107P57740 925 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 DLG4P78352 724 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CCL7P80098 99 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CDR2Q01850 454 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 MEF2AQ02078 507 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ZFP36L1Q07352 338 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SPAG1Q07617 926 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 GOLGA8FQ08AF8 430 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 GOLGA8DPQ0D2H9 430 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TOP3AQ13472 1001 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SEMA5AQ13591 1074 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CUL1Q13616 776 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TGFBIQ15582 683 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 NPTX1Q15818 432 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 STK11Q15831 433 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 MAN2A1Q16706 1144 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 POM121L1PQ3SYA9 428 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 Q3ZCU0 254 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 AARS2Q5JTZ9 985 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 RESP18Q5W5W9 173 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 WSCD1Q658N2 575 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF517Q6ZMY9 492 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 DENND5BQ6ZUT9 1274 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 RFPL4BQ6ZWI9 263 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CPLX4Q7Z7G2 160 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 FJX1Q86VR8 437 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TMTC1Q8IUR5 882 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ERI1Q8IV48 349 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CNGA4Q8IV77 575 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CCDC28AQ8IWP9 274 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CDH26Q8IXH8 852 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC35F3Q8IY50 421 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 PM20D2Q8IYS1 436 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC35F6Q8N357 371 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 Q8N3U1 123 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ST6GALNAC3Q8NDV1 305 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 OR6B3Q8NGW1 331 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 LRRC8CQ8TDW0 803 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 DDI1Q8WTU0 396 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ITLN2Q8WWU7 325 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 WBP2Q969T9 261 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 PNPLA2Q96AD5 504 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 FEM1CQ96JP0 617 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 C18orf12Q96KH6 178 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF641Q96N77 438 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 OPALINQ96PE5 141 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 IL12RB2Q99665 862 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 COQ7Q99807 217 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 C7orf25Q9BPX7 421 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 PYM1Q9BRP8 204 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 KIFC3Q9BVG8 833 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TTLL2Q9BWV7 592 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TDRD1Q9BXT4 1180 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 KRTAP17-1Q9BYP8 105 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 STK33Q9BYT3 514 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CPEB1Q9BZB8 566 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ZMYND12Q9H0C1 365 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 STMN4Q9H169 189 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 OR51B5Q9H339 312 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 DPEP3Q9H4B8 488 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 RAD21L1Q9H4I0 556 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 NCOR1P1Q9H4R4 102 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 MRPL44Q9H9J2 332 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 FANCFQ9NPI8 374 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 MRPL40Q9NQ50 206 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ANKEF1Q9NU02 776 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 STMN3Q9NZ72 180 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 RCOR3Q9P2K3 495 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 STX18Q9P2W9 335 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TAGLN3Q9UI15 199 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 FAF1Q9UNN5 650 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 OSGIN2Q9Y236 505 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CA5BQ9Y2D0 317 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SAR1BQ9Y6B6 198 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 USH1CQ9Y6N9 552 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 ACANP16112 2415 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TRIP11Q15643 1979 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3DA0A087WVF3 549 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3IA0A087WXS9 549 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3EA0A087X179 549 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3KA0A087X1G2 549 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 LOC101059948A0A1B0GTJ6 334 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 FAM237AA0A1B0GTK4 181 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 A0A1W2PQM1 296 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 A6NCN8 305 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3FA6NER0 549 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 OR5K3A6NET4 321 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 ZSCAN5CA6NGD5 496 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 LRRC14BA6NHZ5 514 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF233A6NK53 670 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 GOLGA8JA6NMD2 632 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 A8MXQ7 604 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3LB9A6J9 549 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms