RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CBARPQ8N350 705 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 SVOPQ8N4V2 548 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 BEND7Q8N7W2 519 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 PSD4Q8NDX1 1056 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 CLHC1Q8NHS4 586 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 TRIB2Q92519 343 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 HTATIP2Q9BUP3 242 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SLC32A1Q9H598 525 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ASB8Q9H765 288 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ZFP14Q9HCL3 533 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 IL1RAPQ9NPH3 570 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 STOML2Q9UJZ1 356 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 INTS6Q9UL03 887 aaKnown RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.54□□□□□ -0.88
CD44-206ENST00000415148 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 EIF3FO00303 357 aaPredicted RBP9.54□□□□□ -0.88
CD44-206ENST00000415148 FFAR3O14843 346 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 AREL1O15033 823 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 GPR42O15529 346 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 COCHO43405 550 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 KDM1AO60341 852 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 GJB5O95377 273 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PRAMEF1O95521 474 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 ANXA5P08758 320 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PABPC1P11940 636 aaKnown RBP9.54□□□□□ -0.88
CD44-206ENST00000415148 SPNP16150 400 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 MAGP20916 626 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 IGFBP5P24593 272 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 CA5AP35218 305 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 RHOAP61586 193 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PHC1P78364 1004 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 SLC35A2P78381 396 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 IL5RAQ01344 420 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 SIM2Q14190 667 aaPredicted RBP9.54□□□□□ -0.88
CD44-206ENST00000415148 BCL2A1Q16548 175 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PHKG1Q16816 387 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 KDM4DQ6B0I6 523 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 CCDC81Q6ZN84 652 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 CEP68Q76N32 757 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 GALNT10Q86SR1 603 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 TSPYL5Q86VY4 417 aaPredicted RBP9.54□□□□□ -0.88
CD44-206ENST00000415148 CYP4Z1Q86W10 505 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 TCAIMQ8N3R3 496 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 MCOLN3Q8TDD5 553 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 GLMNQ92990 594 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PYCR2Q96C36 320 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 MYO19Q96H55 970 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 MAGEB10Q96LZ2 347 aaPredicted RBP9.54□□□□□ -0.88
CD44-206ENST00000415148 HHIPQ96QV1 700 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 APOL4Q9BPW4 351 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PSD2Q9BQI7 771 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 KLHL25Q9H0H3 589 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 ZFYVE1Q9HBF4 777 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PARVBQ9HBI1 364 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 ANKHQ9HCJ1 492 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 SNX6Q9UNH7 406 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 PCDHGA10Q9Y5H3 936 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
CD44-206ENST00000415148 LAMA3Q16787 3333 aa9.54□□□□□ -0.88
CD44-206ENST00000415148 A6NL46 340 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 TTC34A8MYJ7 566 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 EVPLLA8MZ36 301 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 H0Y626 953 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 M0R3G1 203 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 DPM1O60762 260 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 MYO1DO94832 1006 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 DIRAS1O95057 198 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 TRIM16O95361 564 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 LATS1O95835 1130 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 CTGFP29279 349 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 PTPN6P29350 595 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 DNAJA1P31689 397 aaKnown RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 GDF5P43026 501 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 CSNK1DP48730 415 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 TRPC1P48995 793 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 TPTEP56180 551 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 SF3B4Q15427 424 aaKnown RBP eCLIP9.53□□□□□ -0.88
CD44-206ENST00000415148 NPTX1Q15818 432 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 CARD16Q5EG05 197 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 OR2T5Q6IEZ7 315 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 CES5AQ6NT32 575 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 FUT10Q6P4F1 479 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 ERICH5Q6P6B1 374 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 FAM151BQ6UXP7 276 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 ZNF551Q7Z340 670 aaPredicted RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 SAPCD2Q86UD0 394 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 RASAL3Q86YV0 1011 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 OR6Q1Q8NGQ2 317 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 OR2T29Q8NH02 315 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 PHF10Q8WUB8 498 aaKnown RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 IPCEF1Q8WWN9 437 aaPredicted RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 CMTM7Q96FZ5 175 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 APOL5Q9BWW9 433 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 MARCH5Q9NX47 278 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 RPS6KA6Q9UK32 745 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 TSC22D4Q9Y3Q8 395 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 ZNF106Q9H2Y7 1883 aaKnown RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 PRAMEF12O95522 483 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 FADS2O95864 444 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms