RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 BORCS5Q969J3 196 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 CENPOQ9BU64 300 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TRNAU1APQ9NX07 287 aaKnown RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ZIM2Q9NZV7 527 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 RHCGQ9UBD6 479 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 VPS9D1Q9Y2B5 631 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 PCDHB3Q9Y5E6 796 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 PCDHGA8Q9Y5G5 932 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ILVBLA1L0T0 632 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 MGAT4DA6NG13 374 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 CFAP99D6REC4 459 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 RFXANKO14593 260 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 OTCP00480 354 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 EPOP01588 193 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ELMSAN1Q6PJG2 1045 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 CHST9Q7L1S5 443 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 VTCN1Q7Z7D3 282 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 UGT2B28Q9BY64 529 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 KLHL25Q9H0H3 589 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TUBA8Q9NY65 449 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 GNPTGQ9UJJ9 305 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 PTBP2Q9UKA9 531 aaKnown RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ACSL6Q9UKU0 697 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 DLGAP4Q9Y2H0 992 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TBC1D3BA6NDS4 549 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 STX16O14662 325 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 HTR1EP28566 365 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 NUDT6P53370 316 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ACSM2AQ08AH3 577 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 PLEKHG6Q3KR16 790 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 PDCD4Q53EL6 469 aaKnown RBP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 EGFLAMQ63HQ2 1017 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ACSM2BQ68CK6 577 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ADAMTSL2Q86TH1 951 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 HORMAD1Q86X24 394 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 ZSWIM9Q86XI8 627 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 TBC1D15Q8TC07 691 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 MGME1Q9BQP7 344 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 RAD21L1Q9H4I0 556 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 POPDC3Q9HBV1 291 aa13.04□□□□□ -0.32
COL6A2-204ENST00000409416 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL6A2-204ENST00000409416 IGLV3-10A0A075B6K4 115 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 C16orf96A6NNT2 1141 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 K7EPI3 171 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 CXCR6O00574 342 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 CCL5P13501 91 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 GNPDA1P46926 289 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 HLCSP50747 726 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 SNRPD1P62314 119 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 TRIM16LQ309B1 348 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 PDE12Q6L8Q7 609 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 ZNF773Q6PK81 442 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 VN1R3Q9BXE9 311 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 PDE10AQ9Y233 779 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 MAP4K5Q9Y4K4 846 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 ELOVL7A1L3X0 281 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 DRGXA6NNA5 263 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 EVPLLA8MZ36 301 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 RGS14O43566 566 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 FGF18O76093 207 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 TSPAN12O95859 305 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 HMGA1P17096 107 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 NAT1P18440 290 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 SUOXP51687 545 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 ACVR1Q04771 509 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 GALNT7Q86SF2 657 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 EID3Q8N140 333 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 ZNF382Q96SR6 550 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 SORBS1Q9BX66 1292 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 OR51B5Q9H339 312 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 NTN4Q9HB63 628 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 ELOVL2Q9NXB9 296 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 GPRC5BQ9NZH0 403 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 DAPK2Q9UIK4 370 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 ST14Q9Y5Y6 855 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 MYO16Q9Y6X6 1858 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 MYO15AQ9UKN7 3530 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 LEFTY2O00292 366 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 LEFTY1O75610 366 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 INMTO95050 263 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 KRT6AP02538 564 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 KRT6BP04259 564 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 POLR2EP19388 210 aaKnown RBP13.03□□□□□ -0.32
COL6A2-204ENST00000409416 HLA-FP30511 346 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 SPAM1P38567 509 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 KRT6CP48668 564 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 NKG7Q16617 165 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 ZNF284Q2VY69 593 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 XKR7Q5GH72 579 aa13.03□□□□□ -0.32
COL6A2-204ENST00000409416 DLEU7Q6UYE1 221 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms