RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 KCNA4P22459 653 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 GSTM2P28161 218 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-203ENST00000409254 CDC16Q13042 620 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 TBCCQ15814 346 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 PTCHD3Q3KNS1 767 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 CCSMST1Q4G0I0 132 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 ZNF678Q5SXM1 525 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 HHATQ5VTY9 493 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 PRAMEF13Q5VWM6 474 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 ARMC6Q6NXE6 501 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 C16orf46Q6P387 395 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 EFL1Q7Z2Z2 1120 aaKnown RBP12.59□□□□□ -0.39
LIMS2-203ENST00000409254 KMT5CQ86Y97 462 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 CACTIN-AS1Q8N1I8 211 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 PTGR2Q8N8N7 351 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-203ENST00000409254 OR6Y1Q8NGX8 325 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 IFI44Q8TCB0 444 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 GRAMD1AQ96CP6 724 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 AHCYL2Q96HN2 611 aaKnown RBP12.59□□□□□ -0.39
LIMS2-203ENST00000409254 SEC16BQ96JE7 1060 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 SELENOSQ9BQE4 189 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 CAAP1Q9H8G2 361 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 C1GALT1Q9NS00 363 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 DNAJC11Q9NVH1 559 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 KCNE2Q9Y6J6 123 aa12.59□□□□□ -0.39
LIMS2-203ENST00000409254 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 A0A1W2PPV9 198 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 NTN3O00634 580 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-203ENST00000409254 TAPBPO15533 448 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 SH3BP5O60239 455 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 DKK1O94907 266 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 CEACAM1P13688 526 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 EPB42P16452 691 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 AMD1P17707 334 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 CASP2P42575 452 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 PRDX1Q06830 199 aaKnown RBP12.58□□□□□ -0.4
LIMS2-203ENST00000409254 NAE1Q13564 534 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 TRA2AQ13595 282 aaKnown RBP eCLIP12.58□□□□□ -0.4
LIMS2-203ENST00000409254 MPP2Q14168 576 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 PDK4Q16654 411 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 GGTA1PQ4G0N0 100 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 SPESP1Q6UW49 350 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 MBOAT1Q6ZNC8 495 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 RGS9BPQ6ZS82 235 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 FRMD7Q6ZUT3 714 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 PRSS42Q7Z5A4 293 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 MTERF4Q7Z6M4 381 aaKnown RBP12.58□□□□□ -0.4
LIMS2-203ENST00000409254 C17orf64Q86WR6 236 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 SFTPA2Q8IWL1 248 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 ABHD11Q8NFV4 315 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 OR4E2Q8NGC2 313 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 OR4D9Q8NGE8 314 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 OR2A1Q8NGT9 310 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 FAM76AQ8TAV0 307 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 ZNF483Q8TF39 744 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-203ENST00000409254 EXT2Q93063 718 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 WDR34Q96EX3 536 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 CNDP1Q96KN2 507 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 TMEM237Q96Q45 408 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 CCDC3Q9BQI4 270 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 NTMT1Q9BV86 223 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 SARGQ9BW04 601 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 UNKQ9C0B0 810 aaKnown RBP12.58□□□□□ -0.4
LIMS2-203ENST00000409254 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 INTS9Q9NV88 658 aaKnown RBP12.58□□□□□ -0.4
LIMS2-203ENST00000409254 HRASLS2Q9NWW9 162 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 FAM53CQ9NYF3 392 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 ACTR10Q9NZ32 417 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 OGFRQ9NZT2 677 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 PCTPQ9UKL6 214 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 SPEGQ15772 3267 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 SPTBP11277 2137 aa12.58□□□□□ -0.4
LIMS2-203ENST00000409254 TRBV23OR9-2A0A075B6M9 112 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 A0A0J9YY10 115 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-203ENST00000409254 OR6C74A6NCV1 312 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 NCF1BA6NI72 391 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-203ENST00000409254 NCF1CA8MVU1 366 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-203ENST00000409254 TMEM114B3SHH9 223 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 TMX2-CTNND1H3BSU7 103 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 TM4SF5O14894 197 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 GDF9O60383 454 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 RFPL3O75679 317 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 WDR47O94967 919 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 OTCP00480 354 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 SERPINE1P05121 402 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 NCF1P14598 390 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-203ENST00000409254 EEF1DP29692 281 aaKnown RBP12.57□□□□□ -0.4
LIMS2-203ENST00000409254 CMPK1P30085 196 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 ALDH3A1P30838 453 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 HSPA7P48741 367 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 PKNOX1P55347 436 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 WDR4P57081 412 aaKnown RBP12.57□□□□□ -0.4
LIMS2-203ENST00000409254 ZNF33BQ06732 778 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 LCP2Q13094 533 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 TUBB8Q3ZCM7 444 aa12.57□□□□□ -0.4
LIMS2-203ENST00000409254 CFAP157Q5JU67 520 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms