RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 OR2T5Q6IEZ7 315 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 ANKRD13BQ86YJ7 626 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 LMNTD1Q8N9Z9 388 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 OR2T29Q8NH02 315 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 FATE1Q969F0 183 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 REXO4Q9GZR2 422 aaKnown RBP16.39■□□□□ 0.21
SYNC-202ENST00000409190 SIRT5Q9NXA8 310 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 TPRKBQ9Y3C4 175 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 SLC28A1O00337 649 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 CNOT3O75175 753 aaKnown RBP16.39■□□□□ 0.21
SYNC-202ENST00000409190 CLDN9O95484 217 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 DNTTP04053 509 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 ALDH2P05091 517 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 UGT2B4P06133 528 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 ITIH1P19827 911 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 CA8P35219 290 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 KRT20P35900 424 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 SLC11A1P49279 550 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 NFATC2Q13469 925 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 HECTD3Q5T447 861 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 HIPK1Q86Z02 1210 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 RAVER1Q8IY67 606 aaKnown RBP16.39■□□□□ 0.21
SYNC-202ENST00000409190 LGALS12Q96DT0 336 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 ASIC4Q96FT7 647 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 ZNF641Q96N77 438 aaPredicted RBP16.39■□□□□ 0.21
SYNC-202ENST00000409190 TESMINQ9Y4I5 508 aa16.39■□□□□ 0.21
SYNC-202ENST00000409190 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 RGS10O43665 173 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 KRT6AP02538 564 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 KRT6BP04259 564 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 KRT6CP48668 564 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 GBX1Q14549 363 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 USP39Q53GS9 565 aaKnown RBP16.38■□□□□ 0.21
SYNC-202ENST00000409190 FUT10Q6P4F1 479 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 P3H2Q8IVL5 708 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 APCDD1Q8J025 514 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 RBFAQ8N0V3 343 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 POC5Q8NA72 575 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 PJA1Q8NG27 643 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 UTP15Q8TED0 518 aaKnown RBP16.38■□□□□ 0.21
SYNC-202ENST00000409190 SLC22A12Q96S37 553 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 TRIM64BA6NI03 449 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 AQP9O43315 295 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 SDC1P18827 310 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 OR1E2P47887 323 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CLCN4P51793 760 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CBX2Q14781 532 aaPredicted RBP16.38■□□□□ 0.21
SYNC-202ENST00000409190 ADNP2Q6IQ32 1131 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CXorf57Q6NSI4 855 aaKnown RBP16.38■□□□□ 0.21
SYNC-202ENST00000409190 RGMBQ6NW40 437 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 TMEM53Q6P2H8 277 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 STK40Q8N2I9 435 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CLIP4Q8N3C7 705 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 GPR156Q8NFN8 814 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 SPPL2AQ8TCT8 520 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 HSH2DQ96JZ2 352 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 AKIP1Q9NQ31 210 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 SERHLQ9NQF3 203 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 NLRC5Q86WI3 1866 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 EFCAB9A8MZ26 197 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CLIC1O00299 241 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 FPGTO14772 594 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 GBAP04062 536 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 GSTT2P0CG29 244 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 GSTT2BP0CG30 244 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CKBP12277 381 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 SMAD3P84022 425 aaKnown RBP16.38■□□□□ 0.21
SYNC-202ENST00000409190 RING1Q06587 406 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 PRSS36Q5K4E3 855 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 NCEH1Q6PIU2 408 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 SYT12Q8IV01 421 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 AADATQ8N5Z0 425 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 MYLIPQ8WY64 445 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CCDC115Q96NT0 180 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 CPPED1Q9BRF8 314 aaPredicted RBP16.38■□□□□ 0.21
SYNC-202ENST00000409190 WDR12Q9GZL7 423 aaKnown RBP16.38■□□□□ 0.21
SYNC-202ENST00000409190 GIN1Q9NXP7 522 aa16.38■□□□□ 0.21
SYNC-202ENST00000409190 PTPRDP23468 1912 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 GLYATL1P3A0A0U1RQE8 302 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 BPIP17213 487 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 HNF1BP35680 557 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 HMGCLP35914 325 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 CRHR2Q13324 411 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 PTCHD3Q3KNS1 767 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 MFSD14CQ5VZR4 134 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 FAM180BQ6P0A1 224 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 UBE2R2Q712K3 238 aaPredicted RBP16.37■□□□□ 0.21
SYNC-202ENST00000409190 TAS2R16Q9NYV7 291 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 Q9Y3F1 56 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 SNX8Q9Y5X2 465 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 ILVBLA1L0T0 632 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 PABPN1LA6NDY0 278 aaKnown RBP16.37■□□□□ 0.21
SYNC-202ENST00000409190 COX7A2P14406 83 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 SERPINB10P48595 397 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 MAD2L1Q13257 205 aaPredicted RBP16.37■□□□□ 0.21
SYNC-202ENST00000409190 C6orf183Q5T699 404 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 KIAA1841Q6NSI8 718 aa16.37■□□□□ 0.21
SYNC-202ENST00000409190 BEND7Q8N7W2 519 aaPredicted RBP16.37■□□□□ 0.21
SYNC-202ENST00000409190 MROQ9BYG7 248 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms