RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PGM2L1Q6PCE3 622 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CNSTQ6PJW8 725 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TXNDC11Q6PKC3 985 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 EIF3MQ7L2H7 374 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 DET1Q7L5Y6 550 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 LIMS2Q7Z4I7 341 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ADCK2Q7Z695 626 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ADAMTSL2Q86TH1 951 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TMEM173Q86WV6 379 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 VANGL1Q8TAA9 524 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 UTP15Q8TED0 518 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 NACC2Q96BF6 587 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 LINGO1Q96FE5 620 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 VMP1Q96GC9 406 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MRGPRX2Q96LB1 330 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 KLF16Q9BXK1 252 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 LHPPQ9H008 270 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SAV1Q9H4B6 383 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 OLAHQ9NV23 265 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 DZANK1Q9NVP4 752 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZNF358Q9NW07 568 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 OSER1Q9NX31 292 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ARL15Q9NXU5 204 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 OPTCQ9UBM4 332 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SLC2A6Q9UGQ3 507 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 RNF11Q9Y3C5 154 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 DYRK1BQ9Y463 629 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CORINQ9Y5Q5 1042 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 ATP6V1G2-DDX39BF2Z307 99 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 VPS4BO75351 444 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SLC25A14O95258 325 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 PRAMEF1O95521 474 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SERPINA1P01009 418 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 AHSGP02765 367 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CATP04040 527 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 C8BP07358 591 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CHRNGP07510 517 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 NCK1P16333 377 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CD247P20963 164 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MYF6P23409 242 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TIE1P35590 1138 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ETV4P43268 484 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PIGFQ07326 219 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 LGALS3BPQ08380 585 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CRY1Q16526 586 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PLEKHG6Q3KR16 790 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZNF362Q5T0B9 420 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 RAET1GQ6H3X3 334 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 BHLHB9Q6PI77 547 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 GDPD4Q6W3E5 623 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 AHSA2Q719I0 299 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 RTL10Q7L3V2 364 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TRAPPC5Q8IUR0 188 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CPNE9Q8IYJ1 553 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 RASSF1Q9NS23 344 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MOCS1Q9NZB8 636 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SLC17A6Q9P2U8 582 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ADAM30Q9UKF2 790 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 POLHQ9Y253 713 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PCDHGB5Q9Y5G0 923 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CITO14578 2027 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 GON4LQ3T8J9 2241 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 A0A0J9YYE9 177 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 AQP12BA6NM10 295 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MEN1O00255 615 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 BCKDKO14874 412 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PSIP1O75475 530 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 SULT1C4O75897 302 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ABLIM3O94929 683 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MLYCDO95822 493 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PTTG1O95997 202 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ESR1P03372 595 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 EPHX1P07099 455 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MTHFRP42898 656 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MAGEA6P43360 314 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SNRPD2P62316 118 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 TAGLNQ01995 201 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZSWIM7Q19AV6 140 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PIGGQ5H8A4 983 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 EPGNQ6UW88 154 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZYG11AQ6WRX3 759 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TMPRSS11AQ6ZMR5 421 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TMEM135Q86UB9 458 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SERPINA9Q86WD7 417 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 AQP12AQ8IXF9 295 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 GPR21Q99679 349 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 DHRS9Q9BPW9 319 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 KCNS3Q9BQ31 491 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TRMOQ9BU70 441 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 RBM38Q9H0Z9 239 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 CWH43Q9H720 699 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SEMA4BQ9NPR2 832 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 SPHK2Q9NRA0 654 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 DNAJC11Q9NVH1 559 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MBD2Q9UBB5 411 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZMAT5Q9UDW3 170 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 LOC285556D6RIA3 1793 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 HAT1O14929 419 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms