RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ZNF567Q8N184 647 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 OR5K2Q8NHB8 316 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 CFAP61Q8NHU2 1237 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 IL17FQ96PD4 163 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 SIGLEC12Q96PQ1 595 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 FOXC2Q99958 501 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
IFT88-203ENST00000389373 UCK2Q9BZX2 261 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 RNF32Q9H0A6 362 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 RTN4Q9NQC3 1192 aaKnown RBP9.18□□□□□ -0.94
IFT88-203ENST00000389373 ANKRD10Q9NXR5 420 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 IMPACTQ9P2X3 320 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 TRPC4Q9UBN4 977 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 TEKT2Q9UIF3 430 aa9.18□□□□□ -0.94
IFT88-203ENST00000389373 A0A0J9YVX5 310 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 C3orf70A6NLC5 250 aaPredicted RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 AGAP14A8MT82 685 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 E9PLN8 166 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 RASGRF2O14827 1237 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 LIN7AO14910 233 aaPredicted RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 CRTAMO95727 393 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 ERVK-10P10266 1014 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 ICAM2P13598 275 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 ACRV1P26436 265 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 EEF1DP29692 281 aaKnown RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 PKLRP30613 574 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 GEMP55040 296 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 FOLH1Q04609 750 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 FRMPD2BQ6IN97 320 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 PRMT9Q6P2P2 845 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 BZW1Q7L1Q6 419 aaKnown RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 EID3Q8N140 333 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 BEST3Q8N1M1 668 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 GHDCQ8N2G8 530 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 LINC01555Q8NAE3 123 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 ACBD4Q8NC06 268 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 PHF10Q8WUB8 498 aaKnown RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 SLC22A18Q96BI1 424 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 HAUS1Q96CS2 278 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 ZNF354BQ96LW1 612 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 DMRTA2Q96SC8 542 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 TREX2Q9BQ50 279 aaPredicted RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 VKORC1Q9BQB6 163 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 ANO10Q9NW15 660 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 DNAJB12Q9NXW2 375 aaKnown RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 PRSS21Q9Y6M0 314 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 FAM169AQ9Y6X4 670 aa9.17□□□□□ -0.94
IFT88-203ENST00000389373 NCOA6Q14686 2063 aaPredicted RBP9.17□□□□□ -0.94
IFT88-203ENST00000389373 MTORP42345 2549 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 TACC2O95359 2948 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 LOC105369274A0A096LPK9 316 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 LOC102723532A0A0G2JNH3 316 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 BHMG1C9JSJ3 638 aaPredicted RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 ADAM10O14672 748 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 SRPX2O60687 465 aaPredicted RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 CTSVO60911 334 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 S1PR4O95977 384 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 H2AFZP0C0S5 128 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 CD46P15529 392 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 PECAM1P16284 738 aaPredicted RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 AP2B1P63010 937 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 OC90Q02509 493 aaPredicted RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 DSG2Q14126 1118 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 FASTKQ14296 549 aaKnown RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 PCOLCEQ15113 449 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 MUM1Q2TAK8 710 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 BTBD16Q32M84 506 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 GPR33Q49SQ1 333 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 SPINK14Q6IE38 97 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 H2AFVQ71UI9 128 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 GALNTL5Q7Z4T8 443 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 TMTC1Q8IUR5 882 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 DMRTC2Q8IXT2 367 aaPredicted RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 OR4N4Q8N0Y3 316 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 FAM98AQ8NCA5 519 aaKnown RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 MMABQ96EY8 250 aaPredicted RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 DNAJC1Q96KC8 554 aaKnown RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 CABS1Q96KC9 395 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 SMR3AQ99954 134 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 ZNF700Q9H0M5 742 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 HSD3B7Q9H2F3 369 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 CXXC4Q9H2H0 198 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 LIME1Q9H400 295 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 KCNK13Q9HB14 408 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 KCNJ16Q9NPI9 418 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 LUC7LQ9NQ29 371 aaKnown RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 UVRAGQ9P2Y5 699 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 SLC39A10Q9ULF5 831 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 MKL2Q9ULH7 1088 aa9.16□□□□□ -0.94
IFT88-203ENST00000389373 BZW2Q9Y6E2 419 aaKnown RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 PRRC2AP48634 2157 aaKnown RBP9.16□□□□□ -0.94
IFT88-203ENST00000389373 IGLV3-16A0A075B6K0 115 aa9.15□□□□□ -0.94
IFT88-203ENST00000389373 IGHV3-20A0A0C4DH32 117 aa9.15□□□□□ -0.94
IFT88-203ENST00000389373 SLC5A10A0PJK1 596 aa9.15□□□□□ -0.94
IFT88-203ENST00000389373 FITM1A5D6W6 292 aa9.15□□□□□ -0.94
IFT88-203ENST00000389373 ZNF487B1APH4 448 aa9.15□□□□□ -0.94
IFT88-203ENST00000389373 CST8O60676 142 aa9.15□□□□□ -0.94
IFT88-203ENST00000389373 SEC24DO94855 1032 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms