RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SLC25A51Q9H1U9 297 aa13.52□□□□□ -0.25
SDC1-202ENST00000381150 CATSPERZQ9NTU4 200 aa13.52□□□□□ -0.25
SDC1-202ENST00000381150 TAS2R13Q9NYV9 303 aa13.52□□□□□ -0.25
SDC1-202ENST00000381150 TAS2R9Q9NYW1 312 aa13.52□□□□□ -0.25
SDC1-202ENST00000381150 NUFIP1Q9UHK0 495 aaKnown RBP13.52□□□□□ -0.25
SDC1-202ENST00000381150 PNMA8CA0A1B0GUJ8 204 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 FAM172BPA6NC97 362 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 SAGE2PA6NJ88 616 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 PER2O15055 1255 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 GPR39O43194 453 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 SH3BGRLO75368 114 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 COL6A1P12109 1028 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 POU2F1P14859 743 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 CD6P30203 668 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 HTR2BP41595 481 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ACLYP53396 1101 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 CASP9P55211 416 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 CREMQ03060 361 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 IRAK1BP1Q5VVH5 260 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ERAP2Q6P179 960 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
SDC1-202ENST00000381150 TADA1Q96BN2 335 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 SEMA3CQ99985 751 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ITPAQ9BY32 194 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ABCG2Q9UNQ0 655 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 VPS4BO75351 444 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 PAPSS2O95340 614 aaPredicted RBP13.51□□□□□ -0.25
SDC1-202ENST00000381150 CTSKP43235 329 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 GNG2P59768 71 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ACOX1Q15067 660 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ZNF181Q2M3W8 571 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ZNF517Q6ZMY9 492 aaPredicted RBP13.51□□□□□ -0.25
SDC1-202ENST00000381150 Q6ZSR9 355 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 LINGO1Q96FE5 620 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ZNF599Q96NL3 588 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 PPP1R2P1Q96PQ5 205 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 TMEM248Q9NWD8 314 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 AFF4Q9UHB7 1163 aaKnown RBP13.51□□□□□ -0.25
SDC1-202ENST00000381150 ZNF225Q9UK10 706 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 TBKBP1A7MCY6 615 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 TLL1O43897 1013 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 TBX18O95935 607 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 SLC35A2P78381 396 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 SMARCB1Q12824 385 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 PWP1Q13610 501 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 CARD16Q5EG05 197 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ZRANB3Q5FWF4 1079 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 LETMD1Q6P1Q0 360 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 SYCE2Q6PIF2 218 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 SVOPLQ8N434 492 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 YIPF6Q96EC8 236 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 HMCESQ96FZ2 354 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 TSSK3Q96PN8 268 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 ATOH8Q96SQ7 321 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 MMP27Q9H306 513 aa13.51□□□□□ -0.25
SDC1-202ENST00000381150 RANGRFQ9HD47 186 aaPredicted RBP13.51□□□□□ -0.25
SDC1-202ENST00000381150 OR1I1O60431 355 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 MLYCDO95822 493 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 RHOQP17081 205 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 ENDOUP21128 410 aaKnown RBP13.5□□□□□ -0.25
SDC1-202ENST00000381150 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 ABRAXAS2Q15018 415 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 MIB1Q86YT6 1006 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 OR4L1Q8NH43 312 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 EEF1AKMT1Q8WVE0 214 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 IGSF8Q969P0 613 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 BTN2A3PQ96KV6 586 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 FBXO44Q9H4M3 255 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 SLC52A3Q9NQ40 469 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 FARSBQ9NSD9 589 aaKnown RBP13.5□□□□□ -0.25
SDC1-202ENST00000381150 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 SPEF1Q9Y4P9 236 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 A0A1W2PQ72 361 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 KMOO15229 486 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 WDR47O94967 919 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 VNN2O95498 520 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 FHP07954 510 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 PTPN2P17706 415 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 POU1F1P28069 291 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 MAGEA11P43364 429 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 OR1G1P47890 313 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 TBX4P57082 545 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 SLAMF1Q13291 335 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 NFE2Q16621 373 aaPredicted RBP13.5□□□□□ -0.25
SDC1-202ENST00000381150 LIX1Q8N485 282 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 ATAD1Q8NBU5 361 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 GPR152Q8TDT2 470 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 ULK4Q96C45 1275 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 SYTL2Q9HCH5 934 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 TMEFF2Q9UIK5 374 aaPredicted RBP13.5□□□□□ -0.25
SDC1-202ENST00000381150 TRMT6Q9UJA5 497 aaKnown RBP13.5□□□□□ -0.25
SDC1-202ENST00000381150 OGDHLQ9ULD0 1010 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 ACTL7AQ9Y615 435 aa13.5□□□□□ -0.25
SDC1-202ENST00000381150 ISPDA4D126 451 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 OR6C70A6NIJ9 312 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 HPRP00739 348 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 WEE1P30291 646 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 CRISP3P54108 245 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 PGBD5Q8N414 524 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms