RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ALKBH8Q96BT7 664 aaKnown RBP18.69■□□□□ 0.58
GTF3A-201ENST00000381140 SLC12A9Q9BXP2 914 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 POPDC3Q9HBV1 291 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 MED4Q9NPJ6 270 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 FAM53CQ9NYF3 392 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 UTP6Q9NYH9 597 aaKnown RBP18.69■□□□□ 0.58
GTF3A-201ENST00000381140 IKZF3Q9UKT9 509 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 RARRES3Q9UL19 164 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 BTRCQ9Y297 605 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 PCDHGA3Q9Y5H0 932 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 IKBKGQ9Y6K9 419 aa18.69■□□□□ 0.58
GTF3A-201ENST00000381140 MDC1Q14676 2089 aaKnown RBP18.69■□□□□ 0.58
GTF3A-201ENST00000381140 ZNF839A8K0R7 811 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 CDC7O00311 574 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 SLC16A5O15375 505 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 RRP8O43159 456 aaKnown RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 INHBAP08476 426 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 HIST1H2AGP0C0S8 130 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 HIST1H2ADP20671 130 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 MAGP20916 626 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 GMPRP36959 345 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 HSD17B2P37059 387 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 EIF2S3P41091 472 aaKnown RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 RAB10P61026 200 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 DEFB110Q30KQ9 67 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 THEMIS2Q5TEJ8 643 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 PPP1R3BQ86XI6 285 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 HMGCLL1Q8TB92 370 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 N4BP2L2Q92802 583 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 HIST1H2AHQ96KK5 128 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 TEFMQ96QE5 360 aaKnown RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 HIST1H2AJQ99878 128 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 H2AFJQ9BTM1 129 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 TRIM54Q9BYV2 358 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 ANKRD11Q6UB99 2663 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 A0A1W2PPV9 198 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 SRRM3A6NNA2 597 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 KLK10O43240 276 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 GUCA1CO95843 209 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 ERGP11308 486 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 IL11RAQ14626 422 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 ARHGAP19Q14CB8 494 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 TGIF1Q15583 401 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 ZIC1Q15915 447 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 KIAA1614Q5VZ46 1190 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 CYB5D1Q6P9G0 228 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 LRRC69Q6ZNQ3 347 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 CDHR3Q6ZTQ4 885 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 MED8Q96G25 268 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 PDLIM5Q96HC4 596 aaKnown RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 CCDC138Q96M89 665 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 PAFAH2Q99487 392 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 ULBP3Q9BZM4 244 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 TWSG1Q9GZX9 223 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 FANCEQ9HB96 536 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 FAM60AQ9NP50 221 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 ARL15Q9NXU5 204 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 STOX2Q9P2F5 926 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-201ENST00000381140 CTNNAL1Q9UBT7 734 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 TAC3Q9UHF0 121 aa18.68■□□□□ 0.58
GTF3A-201ENST00000381140 DMXL2Q8TDJ6 3036 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 EXOC1LA0A1B0GW35 172 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 GOLGA6L10A6NI86 522 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 TMEM150CB9EJG8 249 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 PRICKLE3O43900 615 aaPredicted RBP18.67■□□□□ 0.58
GTF3A-201ENST00000381140 CCDC166P0CW27 439 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 ZNF28P17035 718 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 IMPA1P29218 277 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 MSH2P43246 934 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 CSHL1Q14406 222 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 RASA2Q15283 850 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 KRT71Q3SY84 523 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 FRA10AC1Q70Z53 315 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 TDRPQ86YL5 185 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 RIBC1Q8N443 379 aaPredicted RBP18.67■□□□□ 0.58
GTF3A-201ENST00000381140 OR2L3Q8NG85 312 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 OR2A1Q8NGT9 310 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 SLC44A1Q8WWI5 657 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 TCTN2Q96GX1 697 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 ZPBPQ9BS86 351 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 B3GNT4Q9C0J1 378 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 ATG10Q9H0Y0 220 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 TMBIM4Q9HC24 238 aa18.67■□□□□ 0.58
GTF3A-201ENST00000381140 INTS7Q9NVH2 962 aaKnown RBP18.67■□□□□ 0.58
GTF3A-201ENST00000381140 E7ENX8 843 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 STMND1H3BQB6 276 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 STK17BO94768 372 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 TIAF1O95411 115 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 MYZAPP0CAP1 466 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 FGF5P12034 268 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 CD82P27701 267 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 CMPK1P30085 196 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 GRIA3P42263 894 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 YBX1P67809 324 aaKnown RBP18.66■□□□□ 0.58
GTF3A-201ENST00000381140 TAP2Q03519 686 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 TSNQ15631 228 aaKnown RBP18.66■□□□□ 0.58
GTF3A-201ENST00000381140 ZKSCAN8Q15776 578 aaPredicted RBP18.66■□□□□ 0.58
GTF3A-201ENST00000381140 HSP90B2PQ58FF3 399 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 FIGLAQ6QHK4 219 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 AGTRAPQ6RW13 159 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms