RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 SLC5A5Q92911 643 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 PAK1IP1Q9NWT1 392 aaPredicted RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 LUZP4Q9P127 313 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 IL13P35225 146 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 STT3AP46977 705 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PEX6Q13608 980 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 LRRC37A5PQ49AS3 106 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 IFI44LQ53G44 452 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PIGWQ7Z7B1 504 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ZNF101Q8IZC7 436 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 UBA3Q8TBC4 463 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 C8orf37Q96NL8 207 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 DUSP16Q9BY84 665 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 AGPAT3Q9NRZ7 376 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 POLHQ9Y253 713 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 FGFR1P11362 822 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 IFNGR1P15260 489 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 HOXC9P31274 260 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 DPP6P42658 865 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 GRK6P43250 576 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 BAG6P46379 1132 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PMPCAQ10713 525 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ABLIM2Q6H8Q1 611 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 MARCH9Q86YJ5 346 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 SLC7A5P1Q8MH63 180 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 NPRL2Q8WTW4 380 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 DPYSL5Q9BPU6 564 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 TMPRSS5Q9H3S3 457 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 LYRM2Q9NU23 88 aaPredicted RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 ST14Q9Y5Y6 855 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 MLH3Q9UHC1 1453 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 JUPP14923 745 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 TFEBP19484 476 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 RPL10P27635 214 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 GNPDA1P46926 289 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 GABARAPL2P60520 117 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 RHOAP61586 193 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ZACNQ401N2 412 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 CMPK2Q5EBM0 449 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 FBXO31Q5XUX0 539 aaPredicted RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 SLC47A2Q86VL8 602 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 KLHDC1Q8N7A1 406 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 SLC25A36Q96CQ1 311 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PPM1MQ96MI6 270 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 BTBD1Q9H0C5 482 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 DNTTIP1Q9H147 329 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 LRTM1Q9HBL6 345 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 FBXL21Q9UKT6 434 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ACSL6Q9UKU0 697 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 MRPS33Q9Y291 106 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 MAGEB17A8MXT2 336 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 WASH3PC4AMC7 463 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 TOXO94900 526 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 NR2C1P13056 603 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ZNF41P51814 821 aaPredicted RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 RPP30P78346 268 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 ZNF33BQ06732 778 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ELOAQ14241 798 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 TSTQ16762 297 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 SETMARQ53H47 684 aaPredicted RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 UBAP2Q5T6F2 1119 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 OSTF1Q92882 214 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 GTPBP3Q969Y2 492 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 SGTBQ96EQ0 304 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 TIMM29Q9BSF4 260 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 LACRTQ9GZZ8 138 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PIN4Q9Y237 131 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 CNTRLQ7Z7A1 2325 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PTPRJQ12913 1337 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 A0A1W2PS29 197 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 H7C4K7 107 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 NKRFO15226 690 aaKnown RBP eCLIP8.56□□□□□ -1.04
LIG3-202ENST00000378526 METTL15P1P0C7V9 234 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ZNF286BP0CG31 522 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 BPIP17213 487 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ZNF136P52737 540 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PNLIPRP1P54315 467 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ATXN7L3Q14CW9 347 aaPredicted RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 EPHA10Q5JZY3 1008 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 PRPF38BQ5VTL8 546 aaKnown RBP8.56□□□□□ -1.04
LIG3-202ENST00000378526 LAS2Q8IYD9 372 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 FAM58AQ8N1B3 248 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 OR2AJ1Q8NGZ0 328 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 TGM7Q96PF1 710 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 DNAJC18Q9H819 358 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 CCDC88AQ3V6T2 1871 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 OVOS2A0A0G2JMS6 1433 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 A0A087WZY1 265 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 ANKUB1A6NFN9 424 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 NPIPA2E9PIF3 369 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 NPIPA5E9PKD4 350 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 NPIPA3F8WFD2 350 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 RAMP2O60895 175 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 SGPL1O95470 568 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 GLRA2P23416 452 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 THBS3P49746 956 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 CTBP1Q13363 440 aa8.56□□□□□ -1.04
LIG3-202ENST00000378526 MADCAM1Q13477 382 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms