RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TUBGCP3Q96CW5 907 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 ARL8BQ9NVJ2 186 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 ZNF624Q9P2J8 865 aaPredicted RBP23.11■■□□□ 1.29
SNX3-203ENST00000368979 DYRK1BQ9Y463 629 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 COLEC10Q9Y6Z7 277 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 TECTAO75443 2155 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 CBX6O95503 412 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 KRT6AP02538 564 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 KRT6BP04259 564 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 CELA2BP08218 269 aaPredicted RBP23.1■■□□□ 1.29
SNX3-203ENST00000368979 NDUFS1P28331 727 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 KRT6CP48668 564 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 RAB28P51157 221 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 TSTA3Q13630 321 aaPredicted RBP23.1■■□□□ 1.29
SNX3-203ENST00000368979 DOC2AQ14183 400 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 WDR45BQ5MNZ6 344 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 GRHL2Q6ISB3 625 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 Q6ZSR9 355 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 LONP2Q86WA8 852 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 LINC01555Q8NAE3 123 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 SMPDL3AQ92484 453 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 WDR34Q96EX3 536 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 RIC8BQ9NVN3 520 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 TAAR2Q9P1P5 351 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 GIMAP2Q9UG22 337 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 APOBEC3BQ9UH17 382 aaKnown RBP23.1■■□□□ 1.29
SNX3-203ENST00000368979 SH2B3Q9UQQ2 575 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 CCL27Q9Y4X3 112 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 FANCMQ8IYD8 2048 aa23.1■■□□□ 1.29
SNX3-203ENST00000368979 PRAMEF33A0A0G2JMD5 474 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 A0A1W2PPV9 198 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 UBDO15205 165 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 ULK1O75385 1050 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 UNC5CO95185 931 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 CSF2P04141 144 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 CTSEP14091 401 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 JUNDP17535 347 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 LBPP18428 481 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 HNF4AP41235 474 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 NXPH1P58417 271 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 ZRSR2Q15696 482 aaKnown RBP23.09■■□□□ 1.29
SNX3-203ENST00000368979 OGFOD2Q6N063 350 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 SLCO4C1Q6ZQN7 724 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 ARMCX6Q7L4S7 300 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 LPCAT2Q7L5N7 544 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 TRIM46Q7Z4K8 759 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 C1orf210Q8IVY1 113 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 OR2L8Q8NGY9 312 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 PTCD3Q96EY7 689 aaKnown RBP23.09■■□□□ 1.29
SNX3-203ENST00000368979 MARK4Q96L34 752 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 LRRC61Q9BV99 259 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 FARSBQ9NSD9 589 aaKnown RBP23.09■■□□□ 1.29
SNX3-203ENST00000368979 TXLNGQ9NUQ3 528 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 SNX6Q9UNH7 406 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 ICKQ9UPZ9 632 aa23.09■■□□□ 1.29
SNX3-203ENST00000368979 COPG1Q9Y678 874 aaKnown RBP23.09■■□□□ 1.29
SNX3-203ENST00000368979 SLC22A2O15244 555 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 ALDOCP09972 364 aaKnown RBP23.08■■□□□ 1.29
SNX3-203ENST00000368979 NME1P15531 152 aaKnown RBP23.08■■□□□ 1.29
SNX3-203ENST00000368979 ADSLP30566 484 aaPredicted RBP23.08■■□□□ 1.29
SNX3-203ENST00000368979 SLC19A1P41440 591 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 IYDQ6PHW0 289 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 TMPRSS11BQ86T26 416 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 C2orf73Q8N5S3 287 aaPredicted RBP23.08■■□□□ 1.29
SNX3-203ENST00000368979 TMEM105Q8N8V8 129 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 SLC5A11Q8WWX8 675 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 HBEGFQ99075 208 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 HAUS8Q9BT25 410 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 TUBB6Q9BUF5 446 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 EHD1Q9H4M9 534 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 ZNF490Q9ULM2 529 aaPredicted RBP23.08■■□□□ 1.29
SNX3-203ENST00000368979 G3BP2Q9UN86 482 aaKnown RBP23.08■■□□□ 1.29
SNX3-203ENST00000368979 CAPN7Q9Y6W3 813 aa23.08■■□□□ 1.29
SNX3-203ENST00000368979 VILLO15195 856 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 KDM1AO60341 852 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 ATP5HO75947 161 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 SCTRP47872 440 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 NCALDP61601 193 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 KLF10Q13118 480 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 THEMIS2Q5TEJ8 643 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 ATG9BQ674R7 924 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 SFRP1Q8N474 314 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 CXorf40BQ96DE9 158 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 NSL1Q96IY1 281 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 PCBD2Q9H0N5 130 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 ELOVL6Q9H5J4 265 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 XKR8Q9H6D3 395 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 ACTR5Q9H9F9 607 aaPredicted RBP23.08■■□□□ 1.28
SNX3-203ENST00000368979 MRGBPQ9NV56 204 aa23.08■■□□□ 1.28
SNX3-203ENST00000368979 SERTM1A2A2V5 107 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 H0YIV9 168 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 SLC28A1O00337 649 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 PDYNP01213 254 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 VARSP26640 1264 aaKnown RBP23.07■■□□□ 1.28
SNX3-203ENST00000368979 ATP4BP51164 291 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 CSTF1Q05048 431 aaKnown RBP23.07■■□□□ 1.28
SNX3-203ENST00000368979 ZNF33BQ06732 778 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 SQLEQ14534 574 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 CATSPEREQ5SY80 951 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 TAF8Q7Z7C8 310 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms