RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 PCOLCE2Q9UKZ9 415 aa20.32■□□□□ 0.84
MAP1LC3A-201ENST00000360668 DYRK1BQ9Y463 629 aa20.32■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SPTY2D1-AS1A0A0U1RR47 76 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 E7EQ34 232 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SCAMP1O15126 338 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RGS14O43566 566 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ALDOCP09972 364 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 NPPBP16860 134 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 HNF4AP41235 474 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ZNF33BQ06732 778 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PRKG2Q13237 762 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 FASTKQ14296 549 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RPE65Q16518 533 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GSTA3Q16772 222 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ATP6AP1LQ52LC2 224 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 XKR6Q5GH73 641 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 DUS1LQ6P1R4 473 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RINLQ6ZS11 566 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 HID1Q8IV36 788 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 KLHDC7BQ96G42 594 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SLC6A18Q96N87 628 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 IL17FQ96PD4 163 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MENTQ9BUN1 341 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CADM1Q9BY67 442 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 TMEM168Q9H0V1 697 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 IMP3Q9NV31 184 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GIMAP2Q9UG22 337 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ZNF490Q9ULM2 529 aaPredicted RBP20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PLAGL1Q9UM63 463 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CCL27Q9Y4X3 112 aa20.31■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SERTM1A2A2V5 107 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PEX11AO75192 247 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 THRAP10827 490 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MTHFD1P11586 935 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 COX4I1P13073 169 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 STX1BP61266 288 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ERVK-8P63133 956 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 DOC2AQ14183 400 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ZRSR2Q15696 482 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 USP39Q53GS9 565 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GRHL2Q6ISB3 625 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 LCTLQ6UWM7 567 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SFRP1Q8N474 314 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RP9Q8TA86 221 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PPP3R2Q96LZ3 170 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CAMK1GQ96NX5 476 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RAB11FIP5Q9BXF6 653 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ELOVL6Q9H5J4 265 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 AASDHPPTQ9NRN7 309 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 DLGAP2Q9P1A6 1054 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 TBC1D29Q9UFV1 150 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RAPGEFL1Q9UHV5 662 aa20.3■□□□□ 0.84
MAP1LC3A-201ENST00000360668 LSM1O15116 133 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 IDO1P14902 403 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 AK4P27144 223 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ACTR1BP42025 376 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MRPL19P49406 292 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ACTR1AP61163 376 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RPL6Q02878 288 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 EIF2B5Q13144 721 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 FZD2Q14332 565 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 KRT33BQ14525 404 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SMU1Q2TAY7 513 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 C6orf136Q5SQH8 315 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SLCO4C1Q6ZQN7 724 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 LPCAT2Q7L5N7 544 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SELENOMQ8WWX9 145 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 NEIL2Q969S2 332 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 WDR34Q96EX3 536 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 HAUS8Q9BT25 410 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PCBD2Q9H0N5 130 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 EHD1Q9H4M9 534 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 FARSBQ9NSD9 589 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 INVSQ9Y283 1065 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 OR52A4PA6NMU1 304 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 H0YIV9 168 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PSMD12O00232 456 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 KDM1AO60341 852 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CD22P20273 847 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 NDUFS1P28331 727 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CPA2P48052 419 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ILF3Q12906 894 aaKnown RBP eCLIP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 NR6A1Q15406 480 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 WASHC2DQ5SRD0 308 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PRAMEF14Q5SWL7 426 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PRAMEF13Q5VWM6 474 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 FRG2Q64ET8 278 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CWF19L1Q69YN2 538 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 IQCHQ86VS3 1027 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 NRROSQ86YC3 692 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 POU5F2Q8N7G0 328 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MFSD2AQ8NA29 543 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GPBAR1Q8TDU6 330 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SLC5A11Q8WWX8 675 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SMPDL3AQ92484 453 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 FRG2BQ96QU4 278 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SCHIP1Q9P0W5 487 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 COLEC10Q9Y6Z7 277 aa20.29■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PDYNP01213 254 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 EZRP15311 586 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms