RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ZNF135P52742 658 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 LDB1Q86U70 411 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 ZNF410Q86VK4 478 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ALDH16A1Q8IZ83 802 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 CEMIPQ8WUJ3 1361 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ACOT12Q8WYK0 555 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PIWIL1Q96J94 861 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 DLC1Q96QB1 1528 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 TBCBQ99426 244 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 TMED9Q9BVK6 235 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 TVP23BQ9NYZ1 205 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 KLHL42Q9P2K6 505 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 DISP2A7MBM2 1401 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 A0A1W2PRQ8 180 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 TCRBV21S2A2A0A5A6 115 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 GGT3PA6NGU5 568 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 HSBP1L1C9JCN9 74 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 LILRB5O75023 590 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ZNF3P17036 446 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 FPGSQ05932 587 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ARL16Q0P5N6 197 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 MFSD13AQ14CX5 517 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 TNFAIP8L2Q6P589 184 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 CERS5Q8N5B7 392 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 NAT9Q9BTE0 207 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 KIAA1683Q9H0B3 1180 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 EHD4Q9H223 541 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 KCTD5Q9NXV2 234 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 NENFQ9UMX5 172 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 NCANO14594 1321 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 FABP3P05413 133 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 RPL10P27635 214 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 CCDC116Q8IYX3 515 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 NXPE1Q8N323 547 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 FAM234AQ9H0X4 552 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 GCM1Q9NP62 436 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 C19orf25Q9UFG5 118 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 IL36AQ9UHA7 158 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 CDC14AQ9UNH5 594 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 EFCAB9A8MZ26 197 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 C8orf89P0DMQ9 161 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 RAC2P15153 192 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 NRIP1P48552 1158 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 CDH12P55289 794 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ITIH4Q14624 930 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ARSIQ5FYB1 569 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 MCOLN2Q8IZK6 566 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 OR4E2Q8NGC2 313 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 FBXO25Q8TCJ0 367 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ITFG2Q969R8 447 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 FBXL8Q96CD0 374 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 NUS1Q96E22 293 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 BSCL2Q96G97 398 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 BTBD10Q9BSF8 475 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 SERTAD3Q9UJW9 196 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PADI2Q9Y2J8 665 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 NOP16Q9Y3C1 178 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 E9PI62 339 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 GLI1P08151 1106 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ETS2P15036 469 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 FLT3LGP49771 235 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 CDK9P50750 372 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 EEF1A1P68104 462 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 SLC25A3Q00325 362 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 SIM2Q14190 667 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 UGCGQ16739 394 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 LTC4SQ16873 150 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 EEF1A1P5Q5VTE0 462 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PRPF38BQ5VTL8 546 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 CHADLQ6NUI6 762 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ZC3H14Q6PJT7 736 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 C17orf75Q9HAS0 396 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 RC3H2Q9HBD1 1191 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 TBC1D14Q9P2M4 693 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PCDHA2Q9Y5H9 948 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PRMT5O14744 637 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 MT-ND5P03915 603 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 DLDP09622 509 aaKnown RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 MIPP30301 263 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 CRHR2Q13324 411 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ITGA7Q13683 1181 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ATXN7L3Q14CW9 347 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 WDR45BQ5MNZ6 344 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 OR6Q1Q8NGQ2 317 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 STOML3Q8TAV4 291 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 HDAC7Q8WUI4 952 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 APOPT1Q96IL0 206 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 DYNLRB1Q9NP97 96 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 COMMD3Q9UBI1 195 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 CACNG4Q9UBN1 327 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PCTPQ9UKL6 214 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 COMMD3-BMI1R4GMX3 469 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SLC30A4O14863 429 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 FKBP6O75344 327 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 C6P13671 934 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 TMBIM6P55061 237 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms