RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 AMD1P17707 334 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 ILF3Q12906 894 aaKnown RBP eCLIP15.44■□□□□ 0.06
PDGFB-201ENST00000331163 TMIEQ8NEW7 156 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 DOK4Q8TEW6 326 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 GAPDHSO14556 408 aaPredicted RBP15.44■□□□□ 0.06
PDGFB-201ENST00000331163 KRT6AP02538 564 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 KRT6BP04259 564 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 SBK3P0C264 359 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 RFX3P48380 749 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 KRT6CP48668 564 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 CSNK1DP48730 415 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 PIP5KL1Q5T9C9 394 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 AGBL4Q5VU57 503 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 KRT80Q6KB66 452 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 SFTPA2Q8IWL1 248 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 PNPT1Q8TCS8 783 aaKnown RBP15.44■□□□□ 0.06
PDGFB-201ENST00000331163 LCN9Q8WX39 176 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 TMIGD2Q96BF3 282 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 ECHDC3Q96DC8 303 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 UBXN10Q96LJ8 280 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 ZBTB18Q99592 522 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 C8orf33Q9H7E9 229 aaPredicted RBP15.44■□□□□ 0.06
PDGFB-201ENST00000331163 AKTIPQ9H8T0 292 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 TBC1D17Q9HA65 648 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 FGF22Q9HCT0 170 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 TMPRSS11EQ9UL52 423 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 FEZF1A0PJY2 475 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 SYNDIG1LA6NDD5 238 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 PSMD12O00232 456 aaPredicted RBP15.43■□□□□ 0.06
PDGFB-201ENST00000331163 OTCP00480 354 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 MYF5P13349 255 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 AKT2P31751 481 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 CPOXP36551 454 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 DCTN2Q13561 401 aaKnown RBP15.43■□□□□ 0.06
PDGFB-201ENST00000331163 GAB4Q2WGN9 574 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 IL23RQ5VWK5 629 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 ZDHHC20Q5W0Z9 365 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 NCLNQ969V3 563 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 C3orf30Q96M34 536 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 GPR78Q96P69 363 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 THUMPD3Q9BV44 507 aaKnown RBP15.43■□□□□ 0.06
PDGFB-201ENST00000331163 ZBTB26Q9HCK0 441 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 A8MU76 341 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 ARHGEF33A8MVX0 844 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 GFRA2O00451 464 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 CDK4P11802 303 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 ITGAXP20702 1163 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 STT3AP46977 705 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 ANKRD26P1Q6NSI1 321 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 LETMD1Q6P1Q0 360 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 UGT2A3Q6UWM9 527 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 ATG14Q6ZNE5 492 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 PQLC1Q8N2U9 271 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 EME1Q96AY2 570 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 MSLNLQ96KJ4 702 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 OR51B5Q9H339 312 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 DNAJC11Q9NVH1 559 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 RIC8BQ9NVN3 520 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 PTTG2Q9NZH5 202 aa15.43■□□□□ 0.06
PDGFB-201ENST00000331163 TNPO3Q9Y5L0 923 aaKnown RBP15.43■□□□□ 0.06
PDGFB-201ENST00000331163 THEGLP0DJG4 465 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 DGKQP52824 942 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 CDH15P55291 814 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 KCNK10P57789 538 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 TMEM259Q4ZIN3 620 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 RAB42Q8N4Z0 105 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 GPR150Q8NGU9 434 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 RDH11Q8TC12 318 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 PIGKQ92643 395 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 FATE1Q969F0 183 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 CMTM5Q96DZ9 223 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 MCCC1Q96RQ3 725 aaPredicted RBP15.42■□□□□ 0.06
PDGFB-201ENST00000331163 RAD18Q9NS91 495 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 ANAPC1Q9H1A4 1944 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 MUC3AQ02505 3323 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 UBFD1O14562 309 aaKnown RBP15.42■□□□□ 0.06
PDGFB-201ENST00000331163 VIPP01282 170 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 ACSM2AQ08AH3 577 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 CATSPEREQ5SY80 951 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 HENMT1Q5T8I9 393 aaKnown RBP15.42■□□□□ 0.06
PDGFB-201ENST00000331163 ACSM2BQ68CK6 577 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 ARMC6Q6NXE6 501 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 ATOH8Q96SQ7 321 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 GTPBP2Q9BX10 602 aaKnown RBP15.42■□□□□ 0.06
PDGFB-201ENST00000331163 MED16Q9Y2X0 877 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 DNAJC15Q9Y5T4 150 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 K7EPI3 171 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 GABRG2P18507 467 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 KIR2DL1P43626 348 aaPredicted RBP15.42■□□□□ 0.06
PDGFB-201ENST00000331163 NFKB2Q00653 900 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 AAGABQ6PD74 315 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 BHLHE22Q8NFJ8 381 aaPredicted RBP15.42■□□□□ 0.06
PDGFB-201ENST00000331163 LMX1AQ8TE12 382 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 PEX13Q92968 403 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 COL26A1Q96A83 441 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 AURKCQ9UQB9 309 aa15.42■□□□□ 0.06
PDGFB-201ENST00000331163 RTCAO00442 366 aaKnown RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 KPNA5O15131 536 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 TRMUO75648 421 aaKnown RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 MLYCDO95822 493 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms