RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CCDC190Q86UF4 302 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 CAMK1DQ8IU85 385 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ATPAF2Q8N5M1 289 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 METTL2AQ96IZ6 378 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 INPP5KQ9BT40 448 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 TRIM62Q9BVG3 475 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 CHID1Q9BWS9 393 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 MRPL1Q9BYD6 325 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 HPS4Q9NQG7 708 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ENAMQ9NRM1 1142 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF490Q9ULM2 529 aaPredicted RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 GNA12Q03113 381 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 FUT5Q11128 374 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 RIN1Q13671 783 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 SMAD1Q15797 465 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 SSX1Q16384 188 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 DDR2Q16832 855 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 GLYR1Q49A26 553 aaPredicted RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 CHST15Q7LFX5 561 aaPredicted RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 R3HCC1LQ7Z5L2 792 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 MIER2Q8N344 545 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 PLEKHA8Q96JA3 519 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ACOT13Q9NPJ3 140 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 THSD1Q9NS62 852 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 GNPTGQ9UJJ9 305 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ZFP37Q9Y6Q3 630 aaPredicted RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 NPEPPSL1A6NEC2 478 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 C9JVG2 144 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 WNT9AO14904 365 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 SOAT2O75908 522 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 NCF2P19878 526 aaPredicted RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 RFX2P48378 723 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 GATMP50440 423 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 COG7P83436 770 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 HYAL2Q12891 473 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 GAB1Q13480 694 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ELOAQ14241 798 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF79Q15937 498 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 TCEAL8Q8IYN2 117 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 IPMKQ8NFU5 416 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 FAM210AQ96ND0 272 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 MTIF3Q9H2K0 278 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 CXorf21Q9HAI6 301 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.6□□□□□ -1.198e-7■■■□□ 19.2
CNOT4-201ENST00000315544 WDFY4Q6ZS81 3184 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 SLC38A8A6NNN8 435 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 G3V3Q6 166 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 LBPP18428 481 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 CBLP22681 906 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 PTPN5P54829 565 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 NFATC2Q13469 925 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 GALNT3Q14435 633 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 PUM1Q14671 1186 aaKnown RBP eCLIP7.59□□□□□ -1.194e-8■■■□□ 18.6
CNOT4-201ENST00000315544 MAPRE1Q15691 268 aaKnown RBP7.59□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF385BQ569K4 471 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 HENMT1Q5T8I9 393 aaKnown RBP7.59□□□□□ -1.19
CNOT4-201ENST00000315544 KLC3Q6P597 504 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 HTR3DQ70Z44 454 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 ADHFE1Q8IWW8 467 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 ZCCHC7Q8N3Z6 543 aaKnown RBP7.59□□□□□ -1.19
CNOT4-201ENST00000315544 DEFB123Q8N688 67 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 GPR26Q8NDV2 337 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 CALML6Q8TD86 181 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 PLD4Q96BZ4 506 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 REPS1Q96D71 796 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 GPR21Q99679 349 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 SLC12A9Q9BXP2 914 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 CPEB1Q9BZB8 566 aaKnown RBP7.59□□□□□ -1.19
CNOT4-201ENST00000315544 VCX3BQ9H321 246 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 NECTIN3Q9NQS3 549 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 C1GALT1Q9NS00 363 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 CD274Q9NZQ7 290 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 METTL15A6NJ78 407 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 PRICKLE3O43900 615 aaPredicted RBP7.59□□□□□ -1.19
CNOT4-201ENST00000315544 UGDHO60701 494 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 INMTO95050 263 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 MT-CO1P00395 513 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 TRBC1P01850 177 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 ESR1P03372 595 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 NELFEP18615 380 aaKnown RBP7.59□□□□□ -1.19
CNOT4-201ENST00000315544 UGT1A1P22309 533 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 PEX19P40855 299 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 PTGER3P43115 390 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 ARFIP1P53367 373 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 RAPSNQ13702 412 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 ISLR2Q6UXK2 745 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 SERPINI1Q99574 410 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 EPYCQ99645 322 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 ADAM2Q99965 735 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 CATSPERZQ9NTU4 200 aa7.59□□□□□ -1.19
CNOT4-201ENST00000315544 IQCF5A8MTL0 148 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 H0YIV9 168 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 SLC22A3O75751 556 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 CTSLP07711 333 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 EBLN1P0CF75 366 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 HGFP14210 728 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 SPNP16150 400 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 DESP17661 470 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 CD300LDQ6UXZ3 194 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 DNM1P46Q6ZS02 220 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms