RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 GNA13Q14344 377 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 LPAL2Q16609 132 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 RFX4Q33E94 735 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 CXorf57Q6NSI4 855 aaKnown RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 PPP4R4Q6NUP7 873 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 ZYG11AQ6WRX3 759 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 PIGWQ7Z7B1 504 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 FAM47BQ8NA70 645 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 ARRDC2Q8TBH0 407 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 LMLNQ96KR4 655 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 LENG8Q96PV6 779 aaPredicted RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 REEP1Q9H902 201 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF624Q9P2J8 865 aaPredicted RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF490Q9ULM2 529 aaPredicted RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 RIF1Q5UIP0 2472 aaKnown RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 URADA6NGE7 173 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 H7C0S8 307 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 DBTP11182 482 aaKnown RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 DNAJB1P25685 340 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 CXCL12P48061 93 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 RGS1Q08116 209 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 HLA-DQA1Q5Y7H0 255 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 KDELC1Q6UW63 502 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 NEK10Q6ZWH5 1172 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 CHSY3Q70JA7 882 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 Q7L0L9 218 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 AMIGO2Q86SJ2 522 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 C2CD4AQ8NCU7 369 aaPredicted RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 LMX1AQ8TE12 382 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 SEC14L1Q92503 715 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 KCNJ9Q92806 393 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 RCN3Q96D15 328 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 ENTPD4Q9Y227 616 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 DHRS12A0PJE2 317 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 MUSKO15146 869 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 CLDN9O95484 217 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 GUCA1AP43080 201 aaPredicted RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 RPL34P49207 117 aaKnown RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 ZIK1Q3SY52 487 aaPredicted RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 TMEM31Q5JXX7 168 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 PAGE2Q7Z2X7 111 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 PEX13Q92968 403 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 ISG20Q96AZ6 181 aaKnown RBP9.19□□□□□ -0.94
CCDC113-201ENST00000219299 PKMYT1Q99640 499 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 GSDMCQ9BYG8 508 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 IL17CQ9P0M4 197 aa9.19□□□□□ -0.94
CCDC113-201ENST00000219299 IFNA16P05015 189 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 GSTM1P09488 218 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 GTF2H2Q13888 395 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF77Q15935 545 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 OTUD1Q5VV17 481 aaPredicted RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 GTF2H2CQ6P1K8 395 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 DPP10Q8N608 796 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 NXPE3Q969Y0 559 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TFB2MQ9H5Q4 396 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 IL26Q9NPH9 171 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 PACSIN3Q9UKS6 424 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TPRP12270 2363 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 EP300Q09472 2414 aaPredicted RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TRPM7Q96QT4 1865 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 BTN3A3O00478 584 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 OR1F1O43749 312 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TCEA3O75764 348 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ALAS2P22557 587 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 RPL3P39023 403 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 STAT5AP42229 794 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 GDF5P43026 501 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TAZQ16635 292 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 CNPY1Q3B7I2 92 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 PARS2Q7L3T8 475 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 LIMS2Q7Z4I7 341 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 RBM15BQ8NDT2 890 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 OR2A12Q8NGT7 310 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 CLHC1Q8NHS4 586 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ITFG2Q969R8 447 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 MRM3Q9HC36 420 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 LEF1Q9UJU2 399 aaPredicted RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 FAM92AA1XBS5 289 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 CMPK1P30085 196 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 LSM3P62310 102 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ZSWIM7Q19AV6 140 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF544Q6NX49 715 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 CDC73Q6P1J9 531 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 SLCO6A1Q86UG4 719 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TRAM1L1Q8N609 369 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 LRRC17Q8N6Y2 441 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TMEM145Q8NBT3 493 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 NARS2Q96I59 477 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 MOV10Q9HCE1 1003 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 INTS7Q9NVH2 962 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 HS3ST2Q9Y278 367 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 GMPPBQ9Y5P6 360 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 IGLV3-10A0A075B6K4 115 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 SOBPA7XYQ1 873 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ECI2O75521 394 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 STX11O75558 287 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 CCNKO75909 580 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 CCNDBP1O95273 360 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 GSSP48637 474 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 CACTIN-AS1Q8N1I8 211 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms