RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 GALPQ9UBC7 116 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 NFU1Q9UMS0 254 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 ICKQ9UPZ9 632 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 CDYLQ9Y232 598 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 DHRS7Q9Y394 339 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 PCDHGA8Q9Y5G5 932 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 NFS1Q9Y697 457 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 RP1P56715 2156 aa7□□□□□ -1.29
NPLOC4-221ENST00000625705 CEP250Q9BV73 2442 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PMS2P1A4D2B8 440 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 M0R082 166 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 RASGRF2O14827 1237 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 POLR1CO15160 346 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 TOX3O15405 576 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZBTB14O43829 449 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KIF1CO43896 1103 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZNF500O60304 480 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PRAMEF10O60809 474 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 C1orf105O95561 183 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZBTB11O95625 1053 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 C9P02748 559 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 C8GP07360 202 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 INHBAP08476 426 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CHRM5P08912 532 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 HIST1H2AGP0C0S8 130 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ANKRD34CP0C6C1 535 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 MPC1LP0DKB6 136 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CCL4P13236 92 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 HIST1H2ADP20671 130 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PKLRP30613 574 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 SLC5A2P31639 672 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 RPA3P35244 121 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 SPRP35270 261 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 DEKP35659 375 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CLCN7P51798 805 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KPNA2P52292 529 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CDKN2DP55273 166 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ERVPABLB-1P60509 514 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 HSD11B2P80365 405 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CFHR1Q03591 330 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 NAB1Q13506 487 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 TUBB3Q13509 450 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 USP10Q14694 798 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KIR2DS3Q14952 304 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 EFTUD2Q15029 972 aaKnown RBP eCLIP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 SF1Q15637 639 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KYNUQ16719 465 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KBTBD12Q3ZCT8 623 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 XP32Q5T750 250 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 BROXQ5VW32 411 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ANKS6Q68DC2 871 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 FBXO38Q6PIJ6 1188 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PAQR3Q6TCH7 311 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 XKR5Q6UX68 686 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CEACAM20Q6UY09 585 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 NEK10Q6ZWH5 1172 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 RAPH1Q70E73 1250 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 UBE2R2Q712K3 238 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PIWIL4Q7Z3Z4 852 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PRSS42Q7Z5A4 293 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 TRIM73Q86UV7 250 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZC3HC1Q86WB0 502 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KMT5CQ86Y97 462 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 SYTL1Q8IYJ3 562 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZNF248Q8NDW4 579 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 GIMAP7Q8NHV1 300 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZNF417Q8TAU3 575 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 MCOLN3Q8TDD5 553 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KCNE4Q8WWG9 221 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 FGF11Q92914 225 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 USP7Q93009 1102 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ALKBH8Q96BT7 664 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 HIST1H2AHQ96KK5 128 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZNF578Q96N58 590 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 IL17FQ96PD4 163 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 OR6C1Q96RD1 312 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 TAAR9Q96RI9 348 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZNF587Q96SQ5 575 aaPredicted RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 HIST1H2AJQ99878 128 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CTRCQ99895 268 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 H2AFJQ9BTM1 129 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ASPSCR1Q9BZE9 553 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 RAB33BQ9H082 229 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KLHL25Q9H0H3 589 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 CDC42EP4Q9H3Q1 356 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 ZNF768Q9H5H4 540 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 LRRC4CQ9HCJ2 640 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PDE7BQ9NP56 450 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 MOCS1Q9NZB8 636 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 OR6C2Q9NZP2 312 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 KLHL42Q9P2K6 505 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 EPHA6Q9UF33 1036 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 POMT2Q9UKY4 750 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 VWA7Q9Y334 891 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 PSAT1Q9Y617 370 aa6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 GOLGA4Q13439 2230 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-221ENST00000625705 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
NPLOC4-221ENST00000625705 A0A087WUV0 522 aaPredicted RBP6.98□□□□□ -1.29
NPLOC4-221ENST00000625705 IGHV5-51A0A0C4DH38 117 aa6.98□□□□□ -1.29
NPLOC4-221ENST00000625705 A0A0J9YY10 115 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms