RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 MAGEB3O15480 346 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 E2F6O75461 281 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 MATN4O95460 622 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 KLF8O95600 359 aaPredicted RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 DNTTP04053 509 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3HP0C7X1 549 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 DRD3P35462 400 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 MTHFRP42898 656 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 EMX2Q04743 252 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 INPP5AQ14642 412 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 SKIV2LQ15477 1246 aaKnown RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 TMEM52BQ4KMG9 183 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 PDCD4Q53EL6 469 aaKnown RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 RABL3Q5HYI8 236 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3GQ6DHY5 549 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3CQ6IPX1 549 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 SUSD1Q6UWL2 747 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TMPRSS11BQ86T26 416 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TDHQ8IZJ6 230 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TBC1D3Q8IZP1 549 aaPredicted RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 ATL1Q8WXF7 558 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 ROPN1LQ96C74 230 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 LRRC58Q96CX6 371 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 APOLD1Q96LR9 279 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TMEM74Q96NL1 305 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 NTMT1Q9BV86 223 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 ACAT2Q9BWD1 397 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 LGR4Q9BXB1 951 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 HDAC8Q9BY41 377 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 MRPL40Q9NQ50 206 aaKnown RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 INTS7Q9NVH2 962 aaKnown RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 SLAMF8Q9P0V8 285 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 V9GYQ6 96 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 ATG2AQ2TAZ0 1938 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 A0A1W2PP18 115 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 SLC5A10A0PJK1 596 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 FAM234BA2RU67 622 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TXNDC9O14530 226 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 LATO43561 262 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 UBTFL6P0CB48 400 aaPredicted RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 PRR35P0CG20 571 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 HOXB2P14652 356 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 EPORP19235 508 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 PFN3P60673 137 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 MRPS35P82673 323 aaKnown RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 GBX1Q14549 363 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 ZNF776Q68DI1 518 aaPredicted RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 AAGABQ6PD74 315 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 TMEM184AQ6ZMB5 413 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 MTSS1LQ765P7 747 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 CHST15Q7LFX5 561 aaPredicted RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 KRTCAP2Q8N6L1 136 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 PROKR1Q8TCW9 393 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 RAB7BQ96AH8 199 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 PPWD1Q96BP3 646 aaKnown RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 CCDC138Q96M89 665 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 ACPTQ9BZG2 426 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 VCXQ9H320 206 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 MBNL1Q9NR56 388 aaKnown RBP9.65□□□□□ -0.86
VTA1-205ENST00000620996 HEBP1Q9NRV9 189 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 C1orf109Q9NX04 203 aa9.65□□□□□ -0.86
VTA1-205ENST00000620996 ZNF839A8K0R7 811 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 SLC31A1O15431 190 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 AKAP10O43572 662 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 VARSP26640 1264 aaKnown RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 PEX2P28328 305 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 SLC6A12P48065 614 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 CDKL1Q00532 357 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 WSCD2Q2TBF2 565 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 PGS1Q32NB8 556 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 FAM174BQ3ZCQ3 159 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 AGBL4Q5VU57 503 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 PNCKQ6P2M8 343 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 TTC23LQ6PF05 361 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 KIAA1324Q6UXG2 1013 aaKnown RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 NEK10Q6ZWH5 1172 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 FLCNQ8NFG4 579 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 FBXL8Q96CD0 374 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 DTNBP1Q96EV8 351 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 IL17FQ96PD4 163 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 SLC29A3Q9BZD2 475 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 MKRN2Q9H000 416 aaKnown RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 S1PR5Q9H228 398 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 SGK2Q9HBY8 427 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 ZIM2Q9NZV7 527 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 AURKCQ9UQB9 309 aa9.65□□□□□ -0.87
VTA1-205ENST00000620996 TMA7Q9Y2S6 64 aaKnown RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 PCYT1BQ9Y5K3 369 aaPredicted RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 KIF26AQ9ULI4 1882 aaPredicted RBP9.65□□□□□ -0.87
VTA1-205ENST00000620996 SPTBN5Q9NRC6 3674 aaKnown RBP9.64□□□□□ -0.87
VTA1-205ENST00000620996 IFRD1O00458 451 aaPredicted RBP9.64□□□□□ -0.87
VTA1-205ENST00000620996 LIN7AO14910 233 aaPredicted RBP9.64□□□□□ -0.87
VTA1-205ENST00000620996 PSIP1O75475 530 aaKnown RBP9.64□□□□□ -0.87
VTA1-205ENST00000620996 RSL1D1O76021 490 aaKnown RBP9.64□□□□□ -0.87
VTA1-205ENST00000620996 ADH1BP00325 375 aa9.64□□□□□ -0.87
VTA1-205ENST00000620996 EGFP01133 1207 aa9.64□□□□□ -0.87
VTA1-205ENST00000620996 EIF2DP41214 584 aaKnown RBP9.64□□□□□ -0.87
VTA1-205ENST00000620996 GRIA3P42263 894 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms