RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 C21orf59P57076 290 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 ILF3Q12906 894 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNAP47-213ENST00000617596 UAP1L1Q3KQV9 507 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 SH2D4BQ5SQS7 431 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 FOXB2Q5VYV0 432 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 LRRC74BQ6ZQY2 392 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 PRR23BQ6ZRT6 265 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 RAB44Q7Z6P3 723 aaPredicted RBP15.81■□□□□ 0.12
SNAP47-213ENST00000617596 TAF8Q7Z7C8 310 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 C2orf73Q8N5S3 287 aaPredicted RBP15.81■□□□□ 0.12
SNAP47-213ENST00000617596 PATE1Q8WXA2 126 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 L3HYPDHQ96EM0 354 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 IL17FQ96PD4 163 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 HGH1Q9BTY7 390 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 TNFRSF12AQ9NP84 129 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 ZSCAN32Q9NX65 697 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 PABPN1LA6NDY0 278 aaKnown RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 STX16-NPEPL1H3BU86 382 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 UBFD1O14562 309 aaKnown RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 STX16O14662 325 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 VILLO15195 856 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 CCNT2O60583 730 aaKnown RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 HSPA4LO95757 839 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 CSF2P04141 144 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 SULT1C3Q6IMI6 304 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 DCP2Q8IU60 420 aaKnown RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 DCBLD1Q8N8Z6 715 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 RAB3IL1Q8TBN0 382 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 TRPC4APQ8TEL6 797 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 PPP4R1Q8TF05 950 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 FERD3LQ96RJ6 166 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 ZNF184Q99676 751 aaPredicted RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 DRC3Q9H069 523 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 ZBTB26Q9HCK0 441 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 THAP1Q9NVV9 213 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 LRP4O75096 1905 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 E2F3O00716 465 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 MAP3K7O43318 606 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 KCNJ13O60928 360 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 NME1P15531 152 aaKnown RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 MPSTP25325 297 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 GSTT1P30711 240 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 SIM2Q14190 667 aaPredicted RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 GRB7Q14451 532 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 RPE65Q16518 533 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 KIF19Q2TAC6 998 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 FRMD7Q6ZUT3 714 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 TRIM73Q86UV7 250 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 ARHGAP24Q8N264 748 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 ZNF781Q8N8C0 355 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 ZBTB44Q8NCP5 570 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 OR5K2Q8NHB8 316 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 GPBAR1Q8TDU6 330 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 JPH3Q8WXH2 748 aaPredicted RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 CENPKQ9BS16 269 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 BTBD10Q9BSF8 475 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 COL25A1Q9BXS0 654 aaPredicted RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 PNPOQ9NVS9 261 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 NDUFA13Q9P0J0 144 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 TAAR2Q9P1P5 351 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 STOX2Q9P2F5 926 aaPredicted RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 PILRBQ9UKJ0 227 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 PCTPQ9UKL6 214 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 SNX11Q9Y5W9 270 aa15.8■□□□□ 0.12
SNAP47-213ENST00000617596 ZFC3H1O60293 1989 aaKnown RBP15.8■□□□□ 0.12
SNAP47-213ENST00000617596 TDRD6O60522 2096 aaKnown RBP15.79■□□□□ 0.12
SNAP47-213ENST00000617596 ENTPD5O75356 428 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 PSMG1O95456 288 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 RPS17P08708 135 aaKnown RBP15.79■□□□□ 0.12
SNAP47-213ENST00000617596 IMPA1P29218 277 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 PRDX3P30048 256 aaKnown RBP15.79■□□□□ 0.12
SNAP47-213ENST00000617596 BLKP51451 505 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 CLCN2P51788 898 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 AP1S2P56377 157 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 BNC1Q01954 994 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 ASPHQ12797 758 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 TSTA3Q13630 321 aaPredicted RBP15.79■□□□□ 0.12
SNAP47-213ENST00000617596 FASTKQ14296 549 aaKnown RBP15.79■□□□□ 0.12
SNAP47-213ENST00000617596 PTCHD3Q3KNS1 767 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 ANKS6Q68DC2 871 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 UNC5DQ6UXZ4 953 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 LMX1AQ8TE12 382 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 CD244Q9BZW8 370 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 EPB41L1Q9H4G0 881 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 ZNF624Q9P2J8 865 aaPredicted RBP15.79■□□□□ 0.12
SNAP47-213ENST00000617596 ANGPTL2Q9UKU9 493 aa15.79■□□□□ 0.12
SNAP47-213ENST00000617596 A0A1B0GTW7 788 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 A6NCN8 305 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 PATE3B3GLJ2 98 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 TMEM114B3SHH9 223 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 TMEM233B4DJY2 109 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 H2AFYO75367 372 aaKnown RBP15.78■□□□□ 0.12
SNAP47-213ENST00000617596 CDKL1Q00532 357 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 CLCQ05315 142 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 LSAMPQ13449 338 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 KRT33BQ14525 404 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 KRT72Q14CN4 511 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 ZNF528Q3MIS6 628 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 AGTRAPQ6RW13 159 aa15.78■□□□□ 0.12
SNAP47-213ENST00000617596 ABRAXAS1Q6UWZ7 409 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms