RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ATXN8OSP0DMR3 200 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 CYP2A7P20853 494 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 OAS2P29728 719 aaKnown RBP10.7□□□□□ -0.7
LIG1-211ENST00000596457 ECHS1P30084 290 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 RPA3P35244 121 aaPredicted RBP10.7□□□□□ -0.7
LIG1-211ENST00000596457 SPRP35270 261 aaPredicted RBP10.7□□□□□ -0.7
LIG1-211ENST00000596457 GP5P40197 560 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 UCNP55089 124 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 TAS2R39P59534 338 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 ACY1Q03154 408 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 SLMAPQ14BN4 828 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 DEFB110Q30KQ9 67 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 GRTP1Q5TC63 336 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 LRRC8EQ6NSJ5 796 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 TMEM207Q6UWW9 146 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 CYS1Q717R9 158 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 PPP1R3BQ86XI6 285 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 KMT5CQ86Y97 462 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 CEP97Q8IW35 865 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 GSPT2Q8IYD1 628 aaKnown RBP10.7□□□□□ -0.7
LIG1-211ENST00000596457 SYTL1Q8IYJ3 562 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 D2HGDHQ8N465 521 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 MCOLN3Q8TDD5 553 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 DENND1AQ8TEH3 1009 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 ASB11Q8WXH4 323 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 SLC22A18Q96BI1 424 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 MIPEPQ99797 713 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 MENTQ9BUN1 341 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 DDA1Q9BW61 102 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 ACAT2Q9BWD1 397 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 DPH1Q9BZG8 443 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 L2HGDHQ9H9P8 463 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 GPAMQ9HCL2 828 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 SIDT1Q9NXL6 827 aaKnown RBP10.7□□□□□ -0.7
LIG1-211ENST00000596457 SPATA7Q9P0W8 599 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 APC2O95996 2303 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 TEX51A0A1B0GUA7 166 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 TMEM150CB9EJG8 249 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 POC1B-GALNT4F8VUJ3 575 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 GFYI3L273 518 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 EIF3FO00303 357 aaPredicted RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 PHGDHO43175 533 aaKnown RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 KIAA0754O94854 1291 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 C8GP07360 202 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 HIST1H2AGP0C0S8 130 aaPredicted RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 FAM153BP0C7A2 387 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 HIST1H2ADP20671 130 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 MAGP20916 626 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 DEKP35659 375 aaKnown RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 GRIA3P42263 894 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 PNLIPRP1P54315 467 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 POU4F1Q01851 419 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 SLC5A12Q1EHB4 618 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 FAM153CQ494X1 144 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 THEMIS2Q5TEJ8 643 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 BROXQ5VW32 411 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 CYB5D1Q6P9G0 228 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 MBOAT1Q6ZNC8 495 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 RAPH1Q70E73 1250 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 TMEM126BQ8IUX1 230 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 SPACA3Q8IXA5 215 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 SPATA6LQ8N4H0 392 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 NKAPQ8N5F7 415 aaKnown RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 C19orf47Q8N9M1 422 aaKnown RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 LSM14AQ8ND56 463 aaKnown RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 FLVCR1-AS1Q8TAF5 88 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 TSPAN17Q96FV3 270 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 HIST1H2AHQ96KK5 128 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 TEFMQ96QE5 360 aaKnown RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 CYTH2Q99418 400 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 HIST1H2AJQ99878 128 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 H2AFJQ9BTM1 129 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 ULBP3Q9BZM4 244 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 SLC7A5P2Q9GIP4 190 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 FANCEQ9HB96 536 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 PARVBQ9HBI1 364 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 SYTL2Q9HCH5 934 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 FGF21Q9NSA1 209 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 IRAK4Q9NWZ3 460 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 UTP6Q9NYH9 597 aaKnown RBP10.69□□□□□ -0.7
LIG1-211ENST00000596457 SEMA5BQ9P283 1151 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 PDE10AQ9Y233 779 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 ANKRD12Q6UB98 2062 aa10.69□□□□□ -0.7
LIG1-211ENST00000596457 SDK2Q58EX2 2172 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 NPEPPSL1A6NEC2 478 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ZNF839A8K0R7 811 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 STMND1H3BQB6 276 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 MYO1CO00159 1063 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 CDC7O00311 574 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 RAD1O60671 282 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 SNRNP200O75643 2136 aaKnown RBP10.68□□□□□ -0.7
LIG1-211ENST00000596457 STK17BO94768 372 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 GUCA1CO95843 209 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 SLC16A8O95907 504 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 C1QAP02745 245 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 NTRK1P04629 796 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 LIPCP11150 499 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 FGF5P12034 268 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 STMN1P16949 149 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ZNF28P17035 718 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms