RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 UBE3AQ05086 875 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 CDC20Q12834 499 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 ARHGEF7Q14155 803 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 SPCS2Q15005 226 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 INAVAQ3KP66 663 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 BROXQ5VW32 411 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 FAM109BQ6ICB4 259 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 LETMD1Q6P1Q0 360 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 GOLGA7Q7Z5G4 137 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 MIER2Q8N344 545 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 LEMD2Q8NC56 503 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 OR7G1Q8NGA0 311 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 C19orf43Q9BQ61 176 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 FAM126AQ9BYI3 521 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 ELOVL2Q9NXB9 296 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 ZDHHC3Q9NYG2 299 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 MBD1Q9UIS9 605 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 RWDD3Q9Y3V2 267 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 NOTOA8MTQ0 251 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 MTX2O75431 263 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 IL10P22301 178 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 VIPR2P41587 438 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 SPINT3P49223 89 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 ATP4BP51164 291 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 POLR2LP62875 67 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 RALGDSQ12967 914 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 VPS26BQ4G0F5 336 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 FAM209AQ5JX71 171 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 TBCELQ5QJ74 424 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 C8orf82Q6P1X6 216 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 TMC5Q6UXY8 1006 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 RTL10Q7L3V2 364 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 BTLAQ7Z6A9 289 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 UBE2Q1Q7Z7E8 422 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 OR2T11Q8NH01 316 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 SCAMP4Q969E2 229 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 ERLEC1Q96DZ1 483 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 ZNF486Q96H40 463 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 FBXL20Q96IG2 436 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 CSF3RQ99062 836 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 CERS4Q9HA82 394 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 IL1RL2Q9HB29 575 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 CPNE5Q9HCH3 593 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 AGAP14A8MT82 685 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 CA3P07451 260 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 NNMTP40261 264 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 RAD23AP54725 363 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 GTF2H2Q13888 395 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 DMC1Q14565 340 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 INPP5AQ14642 412 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 DHCR24Q15392 516 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 GTF2H2CQ6P1K8 395 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 MBOAT1Q6ZNC8 495 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 METTL6Q8TCB7 284 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 FRS2Q8WU20 508 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 SKA2Q8WVK7 121 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 MRGPRX3Q96LB0 322 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 ZNF382Q96SR6 550 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 SMPD3Q9NY59 655 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 ZMYM5Q9UJ78 669 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 TAPBPO15533 448 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 DEAF1O75398 565 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 KCNH1O95259 989 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 CAPN1P07384 714 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 FCGR1AP12314 374 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 AKT1P31749 480 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 POLR2IP36954 125 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 CYBRD1Q53TN4 286 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 ADGRD2Q7Z7M1 963 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 AKAP14Q86UN6 197 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 ZNF557Q8N988 423 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 NUSAP1Q9BXS6 441 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 IPPKQ9H8X2 491 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 OARD1Q9Y530 152 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 TNPO3Q9Y5L0 923 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 PIKFYVEQ9Y2I7 2098 aa16.64■□□□□ 0.25
SHKBP1-205ENST00000594973 C5orf67F2Z3F1 127 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 H0YAE9 185 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 OR7A17O14581 309 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 ZNF197O14709 1029 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 ABCB7O75027 752 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 CTSLP07711 333 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 CCR7P32248 378 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 PTPN5P54829 565 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 HSPA14Q0VDF9 509 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 PCBP2Q15366 365 aaKnown RBP eCLIP16.63■□□□□ 0.256e-9■■■■■ 40.7
SHKBP1-205ENST00000594973 TTLL9Q3SXZ7 439 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 ATAD3BQ5T9A4 648 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 PPP2R2DQ66LE6 453 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 BRAT1Q6PJG6 821 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 RETREG3Q86VR2 466 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 C12orf40Q86WS4 652 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 HEATR4Q86WZ0 1026 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 OR4F6Q8NGB9 312 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 SMG7Q92540 1137 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 ZFYVE19Q96K21 471 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 SP140LQ9H930 580 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 WWOXQ9NZC7 414 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 TMPRSS11EQ9UL52 423 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 WASH3PC4AMC7 463 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms