RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 C3orf62Q6ZUJ4 267 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 NEK10Q6ZWH5 1172 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 UBE2R2Q712K3 238 aaPredicted RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 PIWIL4Q7Z3Z4 852 aaKnown RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ADCK2Q7Z695 626 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 STRA8Q7Z7C7 330 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 MCATQ8IVS2 390 aaKnown RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 CTAGE3PQ8IX95 158 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 CPNE9Q8IYJ1 553 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 SYTL1Q8IYJ3 562 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 LMNTD1Q8N9Z9 388 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 LINC01555Q8NAE3 123 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 OR1L3Q8NH93 324 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 KIF18AQ8NI77 898 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 EEF1AKMT1Q8WVE0 214 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ASB11Q8WXH4 323 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 IFT81Q8WYA0 676 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 SMPDL3AQ92484 453 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 SLC39A7Q92504 469 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 EXTL1Q92935 676 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ZUFSPQ96AP4 578 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ZNF501Q96CX3 271 aaPredicted RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 VPS39Q96JC1 886 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 SLC45A3Q96JT2 553 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 MIPEPQ99797 713 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 AARSD1Q9BTE6 412 aaKnown RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 GPR87Q9BY21 358 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 TWSG1Q9GZX9 223 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 SPRTNQ9H040 489 aaPredicted RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 LHX9Q9NQ69 397 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 NSMCE4AQ9NXX6 385 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 NDOR1Q9UHB4 597 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 IL17BQ9UHF5 180 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 GPN3Q9UHW5 284 aaPredicted RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 CDC23Q9UJX2 597 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 CROTQ9UKG9 612 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 VWA7Q9Y334 891 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 TEX264Q9Y6I9 313 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 AP1M2Q9Y6Q5 423 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 LRP4O75096 1905 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 MYLKQ15746 1914 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CDC14CA4D256 554 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CTAGE15A4D2H0 777 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 KRT87PA6NCN2 255 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 ARHGEF33A8MVX0 844 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 C21orf140B9A014 251 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 C9J4A7 227 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 MEN1O00255 615 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 ZSCAN9O15535 394 aaPredicted RBP6.31□□□□□ -1.4
TRAF4-213ENST00000578917 PSIP1O75475 530 aaKnown RBP6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CCNDBP1O95273 360 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 FKBP9O95302 570 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 DLGAP3O95886 979 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SLC16A8O95907 504 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CTAGE8P0CG41 777 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 MPC1LP0DKB6 136 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SFTPCP11686 197 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 OAS2P29728 719 aaKnown RBP6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CCR10P46092 362 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 PNLIPRP1P54315 467 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CDKN2DP55273 166 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 GUCY2DQ02846 1103 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 DNASE1L3Q13609 305 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 LY6DQ14210 128 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 ARHGAP19Q14CB8 494 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 NAA25Q14CX7 972 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 TBR1Q16650 682 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 DEFB110Q30KQ9 67 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 DEFB109BQ30KR1 87 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SOWAHCQ53LP3 525 aaPredicted RBP6.31□□□□□ -1.4
TRAF4-213ENST00000578917 HECTD2Q5U5R9 776 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 PRAMEF17Q5VTA0 474 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 C1orf189Q5VU69 101 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 DUPD1Q68J44 220 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 TLDC1Q6P9B6 456 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 BORAQ6PGQ7 559 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 FIGLAQ6QHK4 219 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 PAQR3Q6TCH7 311 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SUSD1Q6UWL2 747 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CTAGE6Q86UF2 777 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CTAGE4Q8IX94 777 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 ZNF655Q8N720 491 aaPredicted RBP6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CD200R1Q8TD46 325 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 DENND1AQ8TEH3 1009 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CT55Q8WUE5 264 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SNRNP27Q8WVK2 155 aaKnown RBP6.31□□□□□ -1.4
TRAF4-213ENST00000578917 STARD8Q92502 1023 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SEC14L1Q92503 715 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 RERGQ96A58 199 aaPredicted RBP6.31□□□□□ -1.4
TRAF4-213ENST00000578917 LINGO1Q96FE5 620 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 MED8Q96G25 268 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CCDC138Q96M89 665 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 CATSPER2Q96P56 530 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 PKP4Q99569 1192 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SLC30A3Q99726 388 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 C17orf62Q9BQA9 187 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 SELENOSQ9BQE4 189 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 LRRC1Q9BTT6 524 aa6.31□□□□□ -1.4
TRAF4-213ENST00000578917 DPH7Q9BTV6 452 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms