RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CLDN9O95484 217 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 POU2F2P09086 479 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 ALPIP09923 528 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 CCDC159P0C7I6 412 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 HOXB9P17482 250 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-213ENST00000566756 CTPS1P17812 591 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 IRS1P35568 1242 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 GZMMP51124 257 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 PON2Q15165 354 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 RETSATQ6NUM9 610 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 LINC00299Q6ZSB3 139 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 TCAIMQ8N3R3 496 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 TRUB1Q8WWH5 349 aaKnown RBP16.35■□□□□ 0.21
CMTM3-213ENST00000566756 TESCQ96BS2 214 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 ULK4Q96C45 1275 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 FAM210AQ96ND0 272 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 LYSMD1Q96S90 227 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 BOCQ9BWV1 1114 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 AMBRA1Q9C0C7 1298 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 IKZF5Q9H5V7 419 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 KCTD5Q9NXV2 234 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 B3GNT3Q9Y2A9 372 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 FCF1Q9Y324 198 aaKnown RBP16.35■□□□□ 0.21
CMTM3-213ENST00000566756 PRSS21Q9Y6M0 314 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 GLYATL1P3A0A0U1RQE8 302 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 CXorf51AA0A1B0GTR3 108 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 SERTM1A2A2V5 107 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 LOC730098B7Z3J9 87 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 GNGT2O14610 69 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 WNT9AO14904 365 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 PRKD3O94806 890 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 TRIM16O95361 564 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 BCL10O95999 233 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 ITGAMP11215 1152 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 BCKDHAP12694 445 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 ITIH1P19827 911 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 SPAM1P38567 509 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 DCTP40126 519 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 CCR2P41597 374 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 MAGEA2P43356 314 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 RAD23AP54725 363 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 C21orf59P57076 290 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 RPS14P62263 151 aaKnown RBP16.34■□□□□ 0.21
CMTM3-213ENST00000566756 BCL2L1Q07817 233 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 AAK1Q2M2I8 961 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 MPPE1Q53F39 396 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 ATXN7L2Q5T6C5 722 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-213ENST00000566756 SUSD1Q6UWL2 747 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 CHST15Q7LFX5 561 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-213ENST00000566756 LRRC70Q7Z2Q7 622 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 TMEM132CQ8N3T6 1108 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 TANKQ92844 425 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 REXO5Q96IC2 774 aaKnown RBP16.34■□□□□ 0.21
CMTM3-213ENST00000566756 ITCHQ96J02 903 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 C2orf49Q9BVC5 232 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-213ENST00000566756 LHPPQ9H008 270 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 GABARAPL1Q9H0R8 117 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 CFAP97Q9P2B7 532 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 DPP7Q9UHL4 492 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 TMED5Q9Y3A6 229 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 PCDHGB1Q9Y5G3 927 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 ANKRD12Q6UB98 2062 aa16.34■□□□□ 0.21
CMTM3-213ENST00000566756 C1orf232A0A0U1RR37 186 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 LEFTY2O00292 366 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 NRG2O14511 850 aaPredicted RBP16.33■□□□□ 0.21
CMTM3-213ENST00000566756 FFAR3O14843 346 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 GPR42O15529 346 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 ANXA5P08758 320 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 MAPK1P28482 360 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 CSKP41240 450 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 TPD52P55327 224 aaPredicted RBP16.33■□□□□ 0.21
CMTM3-213ENST00000566756 ISL1P61371 349 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 HMGCS1Q01581 520 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 ABHD18Q0P651 414 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 KCNAB2Q13303 367 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 SPIDRQ14159 915 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 ZNF691Q5VV52 312 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 NXPE1Q8N323 547 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 PGBD3Q8N328 593 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 DDHD1Q8NEL9 900 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 ABTB1Q969K4 478 aaPredicted RBP16.33■□□□□ 0.21
CMTM3-213ENST00000566756 MUL1Q969V5 352 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 PLEKHA8Q96JA3 519 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 MAGEB10Q96LZ2 347 aaPredicted RBP16.33■□□□□ 0.21
CMTM3-213ENST00000566756 HHIPQ96QV1 700 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 APOL5Q9BWW9 433 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 ADNPQ9H2P0 1102 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 SLC32A1Q9H598 525 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 SMURF2Q9HAU4 748 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 HCFC1R1Q9NWW0 138 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 RHBDL2Q9NX52 303 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 HECAQ9UBI9 543 aaPredicted RBP16.33■□□□□ 0.21
CMTM3-213ENST00000566756 CRLS1Q9UJA2 301 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 MAGED1Q9Y5V3 778 aaPredicted RBP16.33■□□□□ 0.21
CMTM3-213ENST00000566756 HSPE1-MOB4S4R3N1 261 aa16.33■□□□□ 0.21
CMTM3-213ENST00000566756 A0A0U1RQS6 177 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 LOC100130705A0A1B0GUX0 176 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 M0QX08 132 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 B4GAT1O43505 415 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 MOSPD3O75425 235 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms