RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 OR2L8Q8NGY9 312 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
HERC1-206ENST00000559996 MAPK15Q8TD08 544 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 ZNF483Q8TF39 744 aaPredicted RBP9.08□□□□□ -0.96
HERC1-206ENST00000559996 ZNF75CPQ92670 426 aaPredicted RBP9.08□□□□□ -0.96
HERC1-206ENST00000559996 EXT2Q93063 718 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 PYCR2Q96C36 320 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 CXorf40BQ96DE9 158 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 TBC1D10AQ9BXI6 508 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 CD244Q9BZW8 370 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 GSTO2Q9H4Y5 243 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 UCK1Q9HA47 277 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 TNFRSF12AQ9NP84 129 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 ARL15Q9NXU5 204 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 SPHK1Q9NYA1 384 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 SH2B3Q9UQQ2 575 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 TDRKHQ9Y2W6 561 aaKnown RBP9.08□□□□□ -0.96
HERC1-206ENST00000559996 RNF215Q9Y6U7 377 aa9.08□□□□□ -0.96
HERC1-206ENST00000559996 EME2A4GXA9 379 aaPredicted RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 NUDT21O43809 227 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 SNNO75324 88 aaPredicted RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 STK16O75716 305 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 HIST1H2AGP0C0S8 130 aaPredicted RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 SLC2A4P14672 509 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 TAC1P20366 129 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 HIST1H2ADP20671 130 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 BGNP21810 368 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 MAP4P27816 1152 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 EEF1DP29692 281 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 PRDX3P30048 256 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 MDH1P40925 334 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 HNMTP50135 292 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 PNLIPRP1P54315 467 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 CDH13P55290 713 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 HERVK_113P63132 956 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 GUCY1A3Q02108 690 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 NAE1Q13564 534 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 E2F2Q14209 437 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 PDK4Q16654 411 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 PERM1Q5SV97 790 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 ZCCHC8Q6NZY4 707 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 SUSD1Q6UWL2 747 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 PRR23CQ6ZRP0 262 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 NUDCD3Q8IVD9 361 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 SLC22A9Q8IVM8 553 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 ARL10Q8N8L6 244 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 OR2A1Q8NGT9 310 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 FAM76AQ8TAV0 307 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 MAGEC3Q8TD91 643 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 HIST1H2AHQ96KK5 128 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 TSNARE1Q96NA8 513 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 SORT1Q99523 831 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 HIST1H2AJQ99878 128 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 H2AFJQ9BTM1 129 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 DUSP23Q9BVJ7 150 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 ERVK-6Q9BXR3 956 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 TRIM54Q9BYV2 358 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 IQCGQ9H095 443 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 SLC32A1Q9H598 525 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 INTS9Q9NV88 658 aaKnown RBP9.07□□□□□ -0.96
HERC1-206ENST00000559996 NKIRAS1Q9NYS0 192 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 SPATA7Q9P0W8 599 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 LRIT1Q9P2V4 623 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 PCTPQ9UKL6 214 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 TMCO1Q9UM00 188 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 PADI4Q9UM07 663 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 SLC22A14Q9Y267 594 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 RP1P56715 2156 aa9.07□□□□□ -0.96
HERC1-206ENST00000559996 IGKV1-8A0A0C4DH67 115 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 LILRA5A6NI73 299 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 OR7A17O14581 309 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 KLF11O14901 512 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 SMIM24O75264 130 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 RPN2P04844 631 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 CHRM5P08912 532 aaPredicted RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 CKMT1AP12532 417 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 GFAPP14136 432 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 PNLIPP16233 465 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 GLB1P16278 677 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 TSPAN8P19075 237 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 PSMB5P28074 263 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 MLLT3P42568 568 aaPredicted RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 LSSP48449 732 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 RAB28P51157 221 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 PPP1CAP62136 330 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 SH3BP2P78314 561 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 BST1Q10588 318 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 SLC14A1Q13336 389 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 CHI3L2Q15782 390 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 HHATQ5VTY9 493 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 ANKS6Q68DC2 871 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 METTL2BQ6P1Q9 378 aaKnown RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 TTC23LQ6PF05 361 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 LCTLQ6UWM7 567 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 RGS9BPQ6ZS82 235 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 FRMD7Q6ZUT3 714 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 FRA10AC1Q70Z53 315 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms