RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SNRNP70P08621 437 aaKnown RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 PRR23D2P0DMB1 279 aaPredicted RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 ACP2P11117 423 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 HSPA8P11142 646 aaKnown RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 DGKAP23743 735 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 TIA1P31483 386 aaKnown RBP eCLIP4.12□□□□□ -1.75
CASC4-206ENST00000558847 FUT6P51993 359 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 THOP1P52888 689 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 MTCP1P56278 107 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 MBTD1Q05BQ5 628 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 TEFQ10587 303 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 CA9Q16790 459 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 ZNF674Q2M3X9 581 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.12□□□□□ -1.752e-6■■■■□ 26.1
CASC4-206ENST00000558847 CYP4A22Q5TCH4 519 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 NRARPQ7Z6K4 114 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 PLD3Q8IV08 490 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 TUSC5Q8IXB3 177 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 CLYBLQ8N0X4 340 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 CRYBG2Q8N1P7 616 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 NOA1Q8NC60 698 aaKnown RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 OR7G3Q8NG95 312 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 OR13J1Q8NGT2 312 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 VANGL1Q8TAA9 524 aaPredicted RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 ZNF473Q8WTR7 871 aaKnown RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 NUDCD2Q8WVJ2 157 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 NSL1Q96IY1 281 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 AK8Q96MA6 479 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 RTP3Q9BQQ7 232 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 C1QTNF4Q9BXJ3 329 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 SNX25Q9H3E2 840 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 MMADHCQ9H3L0 296 aaPredicted RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 ZNF701Q9NV72 531 aaPredicted RBP4.12□□□□□ -1.75
CASC4-206ENST00000558847 KCNK7Q9Y2U2 307 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 PCDHGB1Q9Y5G3 927 aa4.12□□□□□ -1.75
CASC4-206ENST00000558847 CAPN9O14815 690 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 ARPC2O15144 300 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 FMO6PO60774 539 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 PRKRAO75569 313 aaKnown RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 PIGNO95427 931 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 CETPP11597 493 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 EEF2P13639 858 aaKnown RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 AZGP1P25311 298 aaKnown RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 UBASH3AP57075 661 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 ASIC1P78348 528 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 UBXN1Q04323 297 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 DMP1Q13316 513 aaPredicted RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 VEZF1Q14119 521 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 NFE2L1Q14494 772 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 CDC37Q16543 378 aaPredicted RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 IZUMO4Q1ZYL8 232 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 SLC10A5Q5PT55 438 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 SYCP3Q8IZU3 236 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 ZNF713Q8N859 430 aaPredicted RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 SPC24Q8NBT2 197 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 OR2T12Q8NG77 320 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 FGFBP3Q8TAT2 258 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 SORCS1Q8WY21 1168 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 SEPT1Q8WYJ6 367 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 PTP4A1Q93096 173 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 PGM2Q96G03 612 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 BSCL2Q96G97 398 aaPredicted RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 RAD9AQ99638 391 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 TRAF4Q9BUZ4 470 aaPredicted RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 VPS33BQ9H267 617 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 HIPK2Q9H2X6 1198 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 TMEM206Q9H813 350 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 LMAN1LQ9HAT1 526 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 UPF2Q9HAU5 1272 aaKnown RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 FGF21Q9NSA1 209 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 DNAJC17Q9NVM6 304 aaKnown RBP4.11□□□□□ -1.75
CASC4-206ENST00000558847 JRKLQ9Y4A0 524 aa4.11□□□□□ -1.75
CASC4-206ENST00000558847 A4D1N5 150 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 ANKRD61A6NGH8 418 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FAM86B1E9PN63 330 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 C16orf97H3BN30 126 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 TULP2O00295 520 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FCGR3BO75015 233 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 RAD51DO75771 328 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 PPP1R3DO95685 299 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 CAVIN2O95810 425 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FAM86B2P0C5J1 330 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 SMIM18P0DKX4 95 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FGF3P11487 239 aaPredicted RBP4.1□□□□□ -1.75
CASC4-206ENST00000558847 PLA2G2AP14555 144 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 CA6P23280 308 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 HNF4AP41235 474 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 CDX1P47902 265 aaPredicted RBP4.1□□□□□ -1.75
CASC4-206ENST00000558847 HERV-K104P61576 105 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 SULT2A1Q06520 285 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 RBBP7Q16576 425 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 PTGISQ16647 500 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 UGT3A2Q3SY77 523 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 KBTBD12Q3ZCT8 623 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 SPSB3Q6PJ21 355 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 CORO6Q6QEF8 472 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 ZNF852Q6ZMS4 543 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 GBP6Q6ZN66 633 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms