RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ABCA12Q86UK0 2595 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 SOWAHDA6NJG2 315 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 DSCR3O14972 297 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 IGHEP01854 428 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 POU3F2P20265 443 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-210ENST00000557431 PTPN7P35236 360 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 TSFMP43897 325 aaKnown RBP13.49□□□□□ -0.25
SLIRP-210ENST00000557431 RAB28P51157 221 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 NAP1L1P55209 391 aaKnown RBP13.49□□□□□ -0.25
SLIRP-210ENST00000557431 KCNK10P57789 538 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 VSX2P58304 361 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-210ENST00000557431 PARP6Q2NL67 630 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 CCSMST1Q4G0I0 132 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 AGAP7PQ5VUJ5 663 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 FRMPD2BQ6IN97 320 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 FIGLAQ6QHK4 219 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 PACS1Q6VY07 963 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 OR11G2Q8NGC1 345 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 OR13J1Q8NGT2 312 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 FAR1Q8WVX9 515 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 DLG3Q92796 817 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 HDAC10Q969S8 669 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 ALS2CR12Q96Q35 445 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 TMEM121Q9BTD3 319 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 PLA2G3Q9NZ20 509 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 FEZ2Q9UHY8 353 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-210ENST00000557431 NFS1Q9Y697 457 aa13.49□□□□□ -0.25
SLIRP-210ENST00000557431 A0A0J9YVX5 310 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 A0A0U1RQJ8 604 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 MROH6A6NGR9 719 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 PRSS44E7EML9 344 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 CTSVO60911 334 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 CELA2AP08217 269 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 GSTM1P09488 218 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 CD9P21926 228 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 GRNP28799 593 aaKnown RBP13.48□□□□□ -0.25
SLIRP-210ENST00000557431 RWDD2BP57060 319 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 GSTM4Q03013 218 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 SF1Q15637 639 aaKnown RBP13.48□□□□□ -0.25
SLIRP-210ENST00000557431 ZRSR2Q15696 482 aaKnown RBP13.48□□□□□ -0.25
SLIRP-210ENST00000557431 IGFL2Q6UWQ7 119 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 ZNF534Q76KX8 674 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 SLC22A15Q8IZD6 547 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 ATG4AQ8WYN0 398 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 FKBP10Q96AY3 582 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 MAGEB10Q96LZ2 347 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-210ENST00000557431 C19orf43Q9BQ61 176 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 SELENOSQ9BQE4 189 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 LACRTQ9GZZ8 138 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 LHPPQ9H008 270 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 EPS8L2Q9H6S3 715 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 ZNF160Q9HCG1 818 aa13.48□□□□□ -0.25
SLIRP-210ENST00000557431 REXO2Q9Y3B8 237 aaKnown RBP13.48□□□□□ -0.25
SLIRP-210ENST00000557431 LRBAP50851 2863 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 MED13LQ71F56 2210 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 LOC105369274A0A096LPK9 316 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 LOC102723532A0A0G2JNH3 316 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 GRID2IPA4D2P6 1211 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 KLHL41O60662 606 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 TJP3O95049 919 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 SNRPB2P08579 225 aaKnown RBP13.47□□□□□ -0.25
SLIRP-210ENST00000557431 CD63P08962 238 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 EDN3P14138 238 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 ARSFP54793 590 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 EEF1A2Q05639 463 aaKnown RBP13.47□□□□□ -0.25
SLIRP-210ENST00000557431 KLC1Q07866 573 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 SPA17Q15506 151 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 KCTD19Q17RG1 926 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-210ENST00000557431 VWA2Q5GFL6 755 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 IRAK1BP1Q5VVH5 260 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 SP5Q6BEB4 398 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-210ENST00000557431 FAAH2Q6GMR7 532 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 OR4N4Q8N0Y3 316 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 DNAAF3Q8N9W5 541 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 TTC29Q8NA56 475 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-210ENST00000557431 ACRBPQ8NEB7 543 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 OR1N1Q8NGS0 311 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 LRRC45Q96CN5 670 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 MIPEPQ99797 713 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 CRB3Q9BUF7 120 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 SYNPO2LQ9H987 977 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 MARCH4Q9P2E8 410 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-210ENST00000557431 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
SLIRP-210ENST00000557431 QSOX1O00391 747 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 PRICKLE3O43900 615 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-210ENST00000557431 JRKO75564 520 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 EIF2S1P05198 315 aaKnown RBP13.46□□□□□ -0.25
SLIRP-210ENST00000557431 PTMAP06454 111 aaKnown RBP13.46□□□□□ -0.25
SLIRP-210ENST00000557431 ETS1P14921 441 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 CYLC1P35663 651 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-210ENST00000557431 WASHC2DQ5SRD0 308 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 TSTD2Q5T7W7 516 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 AFTPHQ6ULP2 937 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 FAM180AQ6UWF9 173 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 ISLR2Q6UXK2 745 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 LAPTM4BQ86VI4 370 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 DCUN1D3Q8IWE4 304 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms