RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GABRB2P47870 512 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 PAPOLAP51003 745 aaKnown RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 RAB28P51157 221 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 ARSFP54793 590 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 DRG2P55039 364 aaKnown RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 IL10RBQ08334 325 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 AP1B1Q10567 949 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 XRCC4Q13426 336 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 ODF1Q14990 250 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 DAZAP2Q15038 168 aaPredicted RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 RPE65Q16518 533 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 PRSS53Q2L4Q9 553 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 COBLL1Q53SF7 1204 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 ANKRD20A8PQ5CZ79 823 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF789Q5FWF6 425 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF766Q5HY98 468 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 C1orf189Q5VU69 101 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 FAM173BQ6P4H8 233 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 BHLHB9Q6PI77 547 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 NCCRP1Q6ZVX7 275 aaPredicted RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 NDUFAF7Q7L592 441 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 STRADAQ7RTN6 431 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 BNIPLQ7Z465 357 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 UBE3DQ7Z6J8 389 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 TSPAN33Q86UF1 283 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 AMZ2Q86W34 360 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 GRAMD1CQ8IYS0 662 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 LRRC75A-AS1Q8N1F1 130 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 HORMAD2Q8N7B1 307 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 CLRN3Q8NCR9 226 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 OR11G2Q8NGC1 345 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 LMO3Q8TAP4 145 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 GPT2Q8TD30 523 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 BRSK1Q8TDC3 778 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 SLC20A1Q8WUM9 679 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 DLG3Q92796 817 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 PIGTQ969N2 578 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 HDAC10Q969S8 669 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 NTAN1Q96AB6 310 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 FKBP10Q96AY3 582 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 CCDC34Q96HJ3 373 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF599Q96NL3 588 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 NUDCD1Q96RS6 583 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 XPO4Q9C0E2 1151 aaKnown RBP4.95□□□□□ -1.62
CKAP4-203ENST00000553039 PPCSQ9HAB8 311 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 SP110Q9HB58 689 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 PDFQ9HBH1 243 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 IRAK4Q9NWZ3 460 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 PKD2L2Q9NZM6 624 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 CHMP5Q9NZZ3 219 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 TRIM10Q9UDY6 481 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 SLC23A2Q9UGH3 650 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 TMEM59LQ9UK28 342 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 RNF112Q9ULX5 631 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 RNF6Q9Y252 685 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 MRFAP1Q9Y605 127 aa4.95□□□□□ -1.62
CKAP4-203ENST00000553039 TLN2Q9Y4G6 2542 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 LRP4O75096 1905 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 NSG1A0A0A6YYJ2 146 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 GTPBP10A4D1E9 387 aaKnown RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 GOLGA8SH3BPF8 625 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 CLDN4O14493 209 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 MAP2K7O14733 419 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 DDX3YO15523 660 aaKnown RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SMPD2O60906 423 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SUN1O94901 812 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 GOSR1O95249 250 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SIX3O95343 332 aaPredicted RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 YEATS4O95619 227 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ONECUT2O95948 504 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PRR35P0CG20 571 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 CYP11B1P15538 503 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 DESP17661 470 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 CTPS1P17812 591 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 POLR2CP19387 275 aaPredicted RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 NDUFS1P28331 727 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PRDX3P30048 256 aaKnown RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PTGS2P35354 604 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ECI1P42126 302 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 NSG1P42857 185 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ME1P48163 572 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SPINT3P49223 89 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 KPNA2P52292 529 aaKnown RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 STC1P52823 247 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 AIF1P55008 147 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 DCAF7P61962 342 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 APBA1Q02410 837 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PMPCAQ10713 525 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SLC9A5Q14940 896 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 FILIP1LQ4L180 1135 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ZCWPW2Q504Y3 356 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 TMEM177Q53S58 311 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 TFDP3Q5H9I0 405 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 E4F1Q66K89 784 aaPredicted RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PDPK2PQ6A1A2 396 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 CRTC3Q6UUV7 619 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 C3P1Q6ZMU1 363 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 RFLNAQ6ZTI6 216 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 MTDHQ86UE4 582 aaKnown RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ZC3H7AQ8IWR0 971 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms