RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 GKN1Q9NS71 199 aa2.84□□□□□ -1.95
CCDC170-203ENST00000544131 FAM207AQ9NSI2 230 aaPredicted RBP2.84□□□□□ -1.95
CCDC170-203ENST00000544131 FAM120CQ9NX05 1096 aaKnown RBP2.84□□□□□ -1.95
CCDC170-203ENST00000544131 PSD3Q9NYI0 1048 aa2.84□□□□□ -1.95
CCDC170-203ENST00000544131 WSB2Q9NYS7 404 aaPredicted RBP2.84□□□□□ -1.95
CCDC170-203ENST00000544131 STUB1Q9UNE7 303 aa2.84□□□□□ -1.95
CCDC170-203ENST00000544131 NME7Q9Y5B8 376 aa2.84□□□□□ -1.95
CCDC170-203ENST00000544131 A0A1W2PR80 420 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 MPTX1A8MV57 137 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 EPM2AB3EWF7 344 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 ZBED4O75132 1171 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 GLRA3O75311 464 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 BAIAP3O94812 1187 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 SEC24AO95486 1093 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 SLC2A2P11168 524 aaPredicted RBP2.83□□□□□ -1.96
CCDC170-203ENST00000544131 CSTF2P33240 577 aaKnown RBP eCLIP2.83□□□□□ -1.96
CCDC170-203ENST00000544131 CDH13P55290 713 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 GSCP56915 257 aaPredicted RBP2.83□□□□□ -1.96
CCDC170-203ENST00000544131 CYCSP99999 105 aaKnown RBP2.83□□□□□ -1.96
CCDC170-203ENST00000544131 CREB5Q02930 508 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 PAX8Q06710 450 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 PEX6Q13608 980 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 MOGAT2Q3SYC2 334 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 DUSP28Q4G0W2 176 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 KRT79Q5XKE5 535 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 TMEM211Q6ICI0 200 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 SZRD1Q7Z422 152 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 TMPRSS11BQ86T26 416 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 NUP37Q8NFH4 326 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 OR1L3Q8NH93 324 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 EXD1Q8NHP7 514 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 ATP8B4Q8TF62 1192 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 PTPMT1Q8WUK0 201 aaPredicted RBP2.83□□□□□ -1.96
CCDC170-203ENST00000544131 SSMEM1Q8WWF3 244 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 DHX58Q96C10 678 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 FAM120BQ96EK7 910 aaKnown RBP2.83□□□□□ -1.96
CCDC170-203ENST00000544131 MS4A10Q96PG2 267 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 THAP2Q9H0W7 228 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 Q9N2K0 584 aa2.83□□□□□ -1.96
CCDC170-203ENST00000544131 CROCCQ5TZA2 2017 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 IGHV3OR16-10A0A075B7F0 116 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 GPR75-ASB3A0A0A6YYF3 556 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 FEZF1A0PJY2 475 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 A6NCN8 305 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 AGAP14A8MT82 685 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TRUB2O95900 331 aaKnown RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 IGHEP01854 428 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TMEM50BP56557 158 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 MTF1Q14872 753 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 CA9Q16790 459 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 PDLIM3Q53GG5 364 aaPredicted RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 SYT14P1Q58G82 188 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 SLC35D3Q5M8T2 416 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 PLEKHS1Q5SXH7 462 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 C11orf63Q6NUN7 778 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 G2E3Q7L622 706 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 ARHGAP22Q7Z5H3 698 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 NUDT13Q86X67 352 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 ABCA7Q8IZY2 2146 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 GUF1Q8N442 669 aaKnown RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 AQP11Q8NBQ7 271 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 MIPOL1Q8TD10 442 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 SYN2Q92777 582 aaPredicted RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 SPDL1Q96EA4 605 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 THOC1Q96FV9 657 aaKnown RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 PRICKLE1Q96MT3 831 aaPredicted RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TIGD1Q96MW7 591 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 NKX3-1Q99801 234 aaPredicted RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TRIM6Q9C030 488 aaPredicted RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 PANK3Q9H999 370 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 HAUS2Q9NVX0 235 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TEX10Q9NXF1 929 aaPredicted RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 DPP3Q9NY33 737 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 C19orf25Q9UFG5 118 aaPredicted RBP2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TP53TG3Q9ULZ0 132 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 PADI2Q9Y2J8 665 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TMED3Q9Y3Q3 217 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 CSNK1G3Q9Y6M4 447 aa2.82□□□□□ -1.96
CCDC170-203ENST00000544131 TMEM221A6NGB7 291 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 ASB14A6NK59 587 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 IPO8O15397 1037 aaKnown RBP2.81□□□□□ -1.96
CCDC170-203ENST00000544131 IGHV3-13P01766 116 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 CAPN3P20807 821 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 SAT1P21673 171 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 TSFMP43897 325 aaKnown RBP2.81□□□□□ -1.96
CCDC170-203ENST00000544131 PGFP49763 221 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 CSNK2BP67870 215 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 ZNF74Q16587 644 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 MTHFSDQ2M296 383 aaKnown RBP2.81□□□□□ -1.96
CCDC170-203ENST00000544131 UGT3A2Q3SY77 523 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 C4orf50Q6ZRC1 276 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 C1orf122Q6ZSJ8 110 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 FBXL16Q8N461 479 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 LINC00612Q8N6U2 182 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 TEX19Q8NA77 164 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 APOBEC4Q8WW27 367 aaKnown RBP2.81□□□□□ -1.96
CCDC170-203ENST00000544131 LPGAT1Q92604 370 aa2.81□□□□□ -1.96
CCDC170-203ENST00000544131 FAM20AQ96MK3 541 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms