RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 AXIN1O15169 862 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 KCNH1O95259 989 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 CTSLP07711 333 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 THRBP10828 461 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 G6PDP11413 515 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 ZNF7P17097 686 aaPredicted RBP16.75■□□□□ 0.27
SPIDR-227ENST00000541342 PRKG2Q13237 762 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 C18orf21Q32NC0 220 aaPredicted RBP16.75■□□□□ 0.27
SPIDR-227ENST00000541342 LAIR2Q6ISS4 152 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 PLPP6Q8IY26 295 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 HS3ST5Q8IZT8 346 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 RBFAQ8N0V3 343 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 MBOAT4Q96T53 435 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 TOR3AQ9H497 397 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 SUN2Q9UH99 717 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 DOLKQ9UPQ8 538 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 PCDHGA8Q9Y5G5 932 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 AGAP14A8MT82 685 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 SULT1C4O75897 302 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ZNF12P17014 697 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ITGB6P18564 788 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 MAGEA10P43363 369 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-227ENST00000541342 DGKGP49619 791 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ENPP6Q6UWR7 440 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 FKBP10Q96AY3 582 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ZNF583Q96ND8 569 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 AMBRA1Q9C0C7 1298 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 CRLS1Q9UJA2 301 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 FUOMA2VDF0 154 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ABCB7O75027 752 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 TULP3O75386 442 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 LEFTY1O75610 366 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 CHEK2O96017 543 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 RAP2AP10114 183 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 GGT1P19440 569 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 MAP4P27816 1152 aaKnown RBP16.74■□□□□ 0.27
SPIDR-227ENST00000541342 PLA2G16P53816 162 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 KCNC4Q03721 635 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 DPY19L1Q2PZI1 675 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 CTU2Q2VPK5 515 aaKnown RBP16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ATP6AP1LQ52LC2 224 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 PTRHD1Q6GMV3 140 aaKnown RBP16.74■□□□□ 0.27
SPIDR-227ENST00000541342 STK32CQ86UX6 486 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 SPARTQ8N0X7 666 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 NXPE1Q8N323 547 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ZNF366Q8N895 744 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ASB16Q96NS5 453 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 ZNF382Q96SR6 550 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 CGREF1Q99674 301 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 APOL5Q9BWW9 433 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 SMURF2Q9HAU4 748 aa16.74■□□□□ 0.27
SPIDR-227ENST00000541342 TSR3Q9UJK0 312 aaKnown RBP16.74■□□□□ 0.27
SPIDR-227ENST00000541342 PORP16435 677 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 MTHFRP42898 656 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 PLIN5Q00G26 463 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 AQP6Q13520 282 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 ARSIQ5FYB1 569 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 BROXQ5VW32 411 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 TXNDC11Q6PKC3 985 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 OR56A4Q8NGH8 313 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 CHPT1Q8WUD6 406 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 PBX4Q9BYU1 374 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 ABCG8Q9H221 673 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 GPN2Q9H9Y4 310 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 COQ6Q9Y2Z9 468 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 LSM1O15116 133 aaKnown RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 HOXC11O43248 304 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 TPP2P29144 1249 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 PIGFQ07326 219 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 CBX3Q13185 183 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 KIAA0040Q15053 153 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 ATP13A5Q4VNC0 1218 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 DDHD1Q8NEL9 900 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 HEPHQ9BQS7 1158 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 IKZF5Q9H5V7 419 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 VAPAQ9P0L0 249 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 GNPTGQ9UJJ9 305 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 GRXCR2A6NFK2 248 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 DEAF1O75398 565 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 RELAQ04206 551 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 GAB4Q2WGN9 574 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 GPR33Q49SQ1 333 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 GALNT18Q6P9A2 607 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 CYP20A1Q6UW02 462 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 SLC16A12Q6ZSM3 486 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 EFL1Q7Z2Z2 1120 aaKnown RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 THAP5Q7Z6K1 395 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 ZBTB8BQ8NAP8 495 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-227ENST00000541342 FGF13Q92913 245 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 SFXN1Q9H9B4 322 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 RIC8BQ9NVN3 520 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 EYSQ5T1H1 3165 aa16.73■□□□□ 0.27
SPIDR-227ENST00000541342 ARNTLO00327 626 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 RECQLP46063 649 aaPredicted RBP16.72■□□□□ 0.27
SPIDR-227ENST00000541342 SLC6A11P48066 632 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 RFTN2Q52LD8 501 aaPredicted RBP16.72■□□□□ 0.27
SPIDR-227ENST00000541342 C16orf87Q6PH81 154 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 ETFBKMTQ8IXQ9 262 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 CLEC4FQ8N1N0 589 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 CHDHQ8NE62 594 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms