RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 NSG1P42857 185 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 ZNF140P52738 457 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 PLOD1Q02809 727 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 OCA2Q04671 838 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 SRSF11Q05519 484 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 SLC18A3Q16572 532 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 KAZNQ674X7 775 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 NLRP9Q7RTR0 991 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 TAS2R42Q7RTR8 314 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 TMTC1Q8IUR5 882 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 SIRT6Q8N6T7 355 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 TTC29Q8NA56 475 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 STT3BQ8TCJ2 826 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 ADAMTS18Q8TE60 1221 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 SLC22A18Q96BI1 424 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 MIEF2Q96C03 454 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 C8orf44Q96CB5 159 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 IQCDQ96DY2 449 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 ZNF285Q96NJ3 590 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 APOL2Q9BQE5 337 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 GORASP1Q9BQQ3 440 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 GBA3Q9H227 469 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 MCCC2Q9HCC0 563 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 ZNF304Q9HCX3 659 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 C3orf18Q9UK00 162 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 AAR2Q9Y312 384 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 MAU2Q9Y6X3 613 aa11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 SNRNP200O75643 2136 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-209ENST00000539982 SLC5A10A0PJK1 596 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 CCL22O00626 93 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 SRPX2O60687 465 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 DIAPH2O60879 1101 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 WFS1O76024 890 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 WDPCPO95876 746 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 F10P00742 488 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 FTH1P02794 183 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 TNNT1P13805 278 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 CD1EP15812 388 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 SLC1A1P43005 524 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 RAB28P51157 221 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 TLE4Q04727 773 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 OLIG2Q13516 323 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 BRD3Q15059 726 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 CDSNQ15517 529 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 C3AR1Q16581 482 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 ITPRIPL1Q6GPH6 555 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 FIGLAQ6QHK4 219 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 CEP97Q8IW35 865 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 METTL27Q8N6F8 245 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 SUN3Q8TAQ9 357 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 CHTF18Q8WVB6 975 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 ELMO1Q92556 727 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 ZUFSPQ96AP4 578 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 QKIQ96PU8 341 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 SELENOSQ9BQE4 189 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 RNF32Q9H0A6 362 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 TSPY26PQ9H489 355 aa11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 INTS7Q9NVH2 962 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 ZNF282Q9UDV7 671 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-209ENST00000539982 NAV3Q8IVL0 2385 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 NCOA6Q14686 2063 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 HYKKA2RU49 373 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 TARM1B6A8C7 271 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 H7C0S8 307 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 QSOX1O00391 747 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 PRAMEF2O60811 474 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 S1PR4O95977 384 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 PRSS56P0CW18 603 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 COX6A1P12074 109 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 CD9P21926 228 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 CXCR2P25025 360 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 PKLRP30613 574 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 TFDP3Q5H9I0 405 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 WASHC2DQ5SRD0 308 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 FAAH2Q6GMR7 532 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 DENND5AQ6IQ26 1287 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 PRMT9Q6P2P2 845 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 NAPRTQ6XQN6 538 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 RIPOR1Q6ZS17 1223 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 LAPTM4BQ86VI4 370 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 PIANPQ8IYJ0 282 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 PRSS58Q8IYP2 241 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 DTWD1Q8N5C7 304 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 LINC01555Q8NAE3 123 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 ENKD1Q9H0I2 346 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 ARNT2Q9HBZ2 717 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 GPAMQ9HCL2 828 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 SMARCAL1Q9NZC9 954 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 TINAGQ9UJW2 476 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 ZNF835Q9Y2P0 537 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 PRSS21Q9Y6M0 314 aa11.09□□□□□ -0.63
CLSTN3-209ENST00000539982 IGLV3-12A0A075B6K2 115 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 IGHV1-45A0A0A0MS14 117 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 A0A1W2PQ72 361 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 OR5H15A6NDH6 313 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 WISP2O76076 250 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 UQCRHP07919 91 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 RBL1P28749 1068 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 EMP2P54851 167 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms