RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 HGFP14210 728 aa18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 CSTF1Q05048 431 aaKnown RBP18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 SPDYAQ5MJ70 313 aa18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 CAPN13Q6MZZ7 669 aaPredicted RBP18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 LONP2Q86WA8 852 aa18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 MYLK4Q86YV6 388 aaPredicted RBP18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 C2orf73Q8N5S3 287 aaPredicted RBP18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 STON2Q8WXE9 905 aa18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 SGPP1Q9BX95 441 aa18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 ACTR8Q9H981 624 aa18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 ZFP69BQ9UJL9 534 aa18.9■□□□□ 0.62
EFCAB11-202ENST00000538485 FCHO1O14526 889 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 WFS1O76024 890 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 SERPINA6P08185 405 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 F3P13726 295 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 NPPBP16860 134 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 JUNDP17535 347 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 BLKP51451 505 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 TSTA3Q13630 321 aaPredicted RBP18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 ACAD11Q709F0 780 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 LPCAT2Q7L5N7 544 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 DDIASQ8IXT1 998 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 CAMK1GQ96NX5 476 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 NUSAP1Q9BXS6 441 aaKnown RBP18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 ZNF624Q9P2J8 865 aaPredicted RBP18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 LNPEPQ9UIQ6 1025 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 PCM1Q15154 2024 aa18.89■□□□□ 0.61
EFCAB11-202ENST00000538485 E7EQ34 232 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 ENO1P06733 434 aaKnown RBP18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 LINC00032P0C843 101 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CTSEP14091 401 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CSNK1EP49674 416 aaKnown RBP18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 C1orf61Q13536 156 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 KRT33BQ14525 404 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 ARHGAP19Q14CB8 494 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 PRRT3Q5FWE3 981 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 WDR45BQ5MNZ6 344 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CCDC28BQ9BUN5 200 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 GSDMCQ9BYG8 508 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 MVB12BQ9H7P6 319 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 TAAR2Q9P1P5 351 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 ARMCX1Q9P291 453 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 APOBEC3BQ9UH17 382 aaKnown RBP18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 TRPS1Q9UHF7 1281 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 POLG2Q9UHN1 485 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 TRBV23OR9-2A0A075B6M9 112 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 FFAR3O14843 346 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 BCAT2O15382 392 aaPredicted RBP18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 GPR42O15529 346 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 UBOX5O94941 541 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CHEK2O96017 543 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CSF2P04141 144 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 HTR6P50406 440 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CHIT1Q13231 466 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CPSF6Q16630 551 aaKnown RBP eCLIP18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CYP2A13Q16696 494 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 SPRED3Q2MJR0 410 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 METTL21CQ5VZV1 264 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 TMEM198Q66K66 360 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 NXNQ6DKJ4 435 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 SCIMPQ6UWF3 145 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 LINC01555Q8NAE3 123 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 OR52E1Q8NGJ3 308 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CEP70Q8NHQ1 597 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 NEIL2Q969S2 332 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 HBEGFQ99075 208 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 LRRC61Q9BV99 259 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CCDC177Q9NQR7 707 aaPredicted RBP18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 KCNE2Q9Y6J6 123 aa18.88■□□□□ 0.61
EFCAB11-202ENST00000538485 CCDC22O60826 627 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 NME1P15531 152 aaKnown RBP18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 NCF2P19878 526 aaPredicted RBP18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 HMOX2P30519 316 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 SLC19A1P41440 591 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 NXPH1P58417 271 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 LARP4Q71RC2 724 aaKnown RBP eCLIP18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 TAF8Q7Z7C8 310 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 L3MBTL4Q8NA19 623 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 ACTRT2Q8TDY3 377 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 SAR1AQ9NR31 198 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 SPATA7Q9P0W8 599 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 SH2B3Q9UQQ2 575 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 HEBP2Q9Y5Z4 205 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 COLEC10Q9Y6Z7 277 aa18.87■□□□□ 0.61
EFCAB11-202ENST00000538485 VILLO15195 856 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 GNAZP19086 355 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 CD22P20273 847 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 HSD17B2P37059 387 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 RAB28P51157 221 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 AFF3P51826 1226 aaKnown RBP18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 IRF8Q02556 426 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 UBAP2LQ14157 1087 aaKnown RBP18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 ABRAXAS2Q15018 415 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 GALNTL6Q49A17 601 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 GGTA1PQ4G0N0 100 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 XKR6Q5GH73 641 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 PRAMEF14Q5SWL7 426 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 IYDQ6PHW0 289 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 IL27RAQ6UWB1 636 aa18.86■□□□□ 0.61
EFCAB11-202ENST00000538485 CCDC121Q6ZUS5 278 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms