RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 NAA25Q14CX7 972 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 NRROSQ86YC3 692 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 TMEM79Q9BSE2 394 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 ZDHHC5Q9C0B5 715 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMPD1-208ENST00000533123 TBC1D29Q9UFV1 150 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 PTBP2Q9UKA9 531 aaKnown RBP17.97■□□□□ 0.47
SMPD1-208ENST00000533123 PDE10AQ9Y233 779 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 BTRCQ9Y297 605 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 TNRC6BQ9UPQ9 1833 aaKnown RBP17.97■□□□□ 0.47
SMPD1-208ENST00000533123 A0A1B0GTW7 788 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PDZK1P1A8MUH7 402 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PIP5K1BO14986 540 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 CSF2P04141 144 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 C8GP07360 202 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 SLC35G4P0C7Q5 338 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 CTSEP14091 401 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 GDF5P43026 501 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 RPIAP49247 311 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 BLKP51451 505 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PCBP2Q15366 365 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PRRT3Q5FWE3 981 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 GOLGA7Q7Z5G4 137 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PDZD3Q86UT5 571 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 CEP70Q8NHQ1 597 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 RHBDF1Q96CC6 855 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 FOPNLQ96NB1 174 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 RAB3IPQ96QF0 476 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 SLC12A9Q9BXP2 914 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 NOL11Q9H8H0 719 aaKnown RBP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PARVBQ9HBI1 364 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 GIMAP2Q9UG22 337 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 APOBEC3BQ9UH17 382 aaKnown RBP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 CIDEBQ9UHD4 219 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 COPG1Q9Y678 874 aaKnown RBP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 CABIN1Q9Y6J0 2220 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 FANCMQ8IYD8 2048 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PSIP1O75475 530 aaKnown RBP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 CRCPO75575 148 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 MLYCDO95822 493 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 EML2O95834 649 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PIK3R1P27986 724 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 ILF3Q12906 894 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 TEAD4Q15561 434 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 PHC3Q8NDX5 983 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 ACTRT2Q8TDY3 377 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 TFGQ92734 400 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-208ENST00000533123 WWOXQ9NZC7 414 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 ASF1AQ9Y294 204 aa17.96■□□□□ 0.47
SMPD1-208ENST00000533123 ARHGEF33A8MVX0 844 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 IFRD1O00458 451 aaPredicted RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 GSC2O15499 205 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 ESRRBO95718 433 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 NME1P15531 152 aaKnown RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 BDKRB1P46663 353 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 CLCA4Q14CN2 919 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 CCSMST1Q4G0I0 132 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 GPRIN3Q6ZVF9 776 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 SYT12Q8IV01 421 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 RASGRP3Q8IV61 690 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 DDIASQ8IXT1 998 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 KIRREL3Q8IZU9 778 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 CPSF7Q8N684 471 aaKnown RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 TNPO3Q9Y5L0 923 aaKnown RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 OR52A4PA6NMU1 304 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 OR7A17O14581 309 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 CCNT2O60583 730 aaKnown RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 OR4F21O95013 312 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 LINC00032P0C843 101 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 CYP2A7P20853 494 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 ARL1P40616 181 aaPredicted RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 ERVPABLB-1P60509 514 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 MXRA7P84157 204 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 SP140Q13342 867 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 GTF2H2Q13888 395 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 KIF19Q2TAC6 998 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 CAPRIN2Q6IMN6 1127 aaKnown RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 GTF2H2CQ6P1K8 395 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 LETMD1Q6P1Q0 360 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 GPBAR1Q8TDU6 330 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 C12orf66Q96MD2 445 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 INSM2Q96T92 566 aaPredicted RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 LRRC61Q9BV99 259 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 ARL15Q9NXU5 204 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 SCHIP1Q9P0W5 487 aaPredicted RBP17.95■□□□□ 0.46
SMPD1-208ENST00000533123 R4GN57 208 aa17.95■□□□□ 0.46
SMPD1-208ENST00000533123 GPR179Q6PRD1 2367 aa17.94■□□□□ 0.46
SMPD1-208ENST00000533123 SLC16A5O15375 505 aa17.94■□□□□ 0.46
SMPD1-208ENST00000533123 C1orf105O95561 183 aa17.94■□□□□ 0.46
SMPD1-208ENST00000533123 CATP04040 527 aaKnown RBP17.94■□□□□ 0.46
SMPD1-208ENST00000533123 HIST1H2AGP0C0S8 130 aaPredicted RBP17.94■□□□□ 0.46
SMPD1-208ENST00000533123 COX4I1P13073 169 aa17.94■□□□□ 0.46
SMPD1-208ENST00000533123 HIST1H2ADP20671 130 aa17.94■□□□□ 0.46
SMPD1-208ENST00000533123 MAP4P27816 1152 aaKnown RBP17.94■□□□□ 0.46
SMPD1-208ENST00000533123 UAP1L1Q3KQV9 507 aa17.94■□□□□ 0.46
SMPD1-208ENST00000533123 TCHHL1Q5QJ38 904 aaPredicted RBP17.94■□□□□ 0.46
SMPD1-208ENST00000533123 SULT1C3Q6IMI6 304 aa17.94■□□□□ 0.46
SMPD1-208ENST00000533123 DUS1LQ6P1R4 473 aaKnown RBP17.94■□□□□ 0.46
SMPD1-208ENST00000533123 CHSY3Q70JA7 882 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms