RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MORF4L2Q15014 288 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 DPH2Q9BQC3 489 aaPredicted RBP29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 NAT9Q9BTE0 207 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 SPATA7Q9P0W8 599 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 RNF14Q9UBS8 474 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 FANCGO15287 622 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 PSIP1O75475 530 aaKnown RBP29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 HAUS5O94927 633 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 FKBP9O95302 570 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 UGT8Q16880 541 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 PTCHD3Q3KNS1 767 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 BBS9Q3SYG4 887 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 SPANXN3Q5MJ09 141 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 NEK10Q6ZWH5 1172 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 ENDOVQ8N8Q3 282 aaKnown RBP29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 GIMAP7Q8NHV1 300 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 NLNQ9BYT8 704 aa29.14■■■□□ 2.26
SSSCA1-207ENST00000533115 CAPN1P07384 714 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 CTSBP07858 339 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 CYP2A13Q16696 494 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 EEF1AKMT2Q5JPI9 291 aaKnown RBP29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 ZNF385CQ66K41 422 aaPredicted RBP29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 TLDC1Q6P9B6 456 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 FIGLAQ6QHK4 219 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 OR9A1PQ8NGU1 263 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 GABPB2Q8TAK5 448 aaPredicted RBP29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 EURLQ9NYK6 297 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 DHRS7Q9Y394 339 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 HELZ2Q9BYK8 2649 aaKnown RBP29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 SPTA1P02549 2419 aa29.13■■■□□ 2.25
SSSCA1-207ENST00000533115 SEC16AO15027 2179 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 ARHGEF33A8MVX0 844 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 SMAPO00193 183 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 ZSCAN9O15535 394 aaPredicted RBP29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 TTI1O43156 1089 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 ERVK-10P10266 1014 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 AGXTP21549 392 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 FCRL6Q6DN72 434 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 RHBDD2Q6NTF9 364 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 HIBCHQ6NVY1 386 aaPredicted RBP29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 FAM198BQ6UWH4 519 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 IGDCC3Q8IVU1 814 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 PDIK1LQ8N165 341 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 C2CD4AQ8NCU7 369 aaPredicted RBP29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 INPP5DQ92835 1189 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 TRIM51Q9BSJ1 452 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 FAM114A2Q9NRY5 505 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 IRAK4Q9NWZ3 460 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 MAN2B2Q9Y2E5 1009 aa29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 HEMK1Q9Y5R4 338 aaPredicted RBP29.12■■■□□ 2.25
SSSCA1-207ENST00000533115 CATP04040 527 aaKnown RBP29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 PSMB5P28074 263 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 CUL1Q13616 776 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 IL10RAQ13651 578 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 MCATQ8IVS2 390 aaKnown RBP29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 ZNF655Q8N720 491 aaPredicted RBP29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 THAP4Q8WY91 577 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 ZUFSPQ96AP4 578 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 GPR21Q99679 349 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 AARSD1Q9BTE6 412 aaKnown RBP29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 TCFL5Q9UL49 500 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 SNX7Q9UNH6 387 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 SRPK3Q9UPE1 567 aa29.11■■■□□ 2.25
SSSCA1-207ENST00000533115 A0A1W2PPV9 198 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 TARM1B6A8C7 271 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 MYO1CO00159 1063 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 MPC1LP0DKB6 136 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 CBSLP0DN79 551 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 ERGP11308 486 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 CBSP35520 551 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 GRIA3P42263 894 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 FASTKQ14296 549 aaKnown RBP29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 ZC3H12BQ5HYM0 836 aaKnown RBP29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 C9orf43Q8TAL5 461 aaPredicted RBP29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 CD200R1Q8TD46 325 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 PWWP2AQ96N64 755 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 MIPEPQ99797 713 aa29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.1■■■□□ 2.25
SSSCA1-207ENST00000533115 C9J4A7 227 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 VPS26AO75436 327 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 ENO3P13929 434 aaPredicted RBP29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 ELK3P41970 407 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 ITGA8P53708 1063 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 NFKB2Q00653 900 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 NCF4Q15080 339 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 C1orf189Q5VU69 101 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 SPNS2Q8IVW8 549 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 CNTN4Q8IWV2 1026 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 OR2L3Q8NG85 312 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 OR2A1Q8NGT9 310 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 PROKR1Q8TCW9 393 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 ABHD17AQ96GS6 310 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 SNF8Q96H20 258 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 GBP5Q96PP8 586 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 NDC1Q9BTX1 674 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 DHCR7Q9UBM7 475 aaKnown RBP29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 KLK4Q9Y5K2 254 aa29.09■■■□□ 2.25
SSSCA1-207ENST00000533115 SEC31AO94979 1220 aaKnown RBP29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 PMS2P54278 862 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 ARHGAP19Q14CB8 494 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms