RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 DIRAS3O95661 229 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 CCDC172P0C7W6 258 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 ARSBP15848 533 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 PRLRP16471 622 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 MAOAP21397 527 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 CDH3P22223 829 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 USP8P40818 1118 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 COMPP49747 757 aaPredicted RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 ACY1Q03154 408 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 ZNF273Q14593 569 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 RBMS2Q15434 407 aaKnown RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 ZNF284Q2VY69 593 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 WASHC2DQ5SRD0 308 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 MANEAQ5SRI9 462 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 TEX35Q5T0J7 233 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 LRIF1Q5T3J3 769 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 DCAF12L2Q5VW00 463 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 KRT79Q5XKE5 535 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 METTL2BQ6P1Q9 378 aaKnown RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 RBM43Q6ZSC3 357 aaKnown RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 DPPA4Q7L190 304 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 MON1BQ7L1V2 547 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 MCEMP1Q8IX19 187 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 OR52M1Q8NGK5 317 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 RAPGEF5Q92565 580 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 ERGIC1Q969X5 290 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 METTL2AQ96IZ6 378 aaKnown RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 FERMT1Q9BQL6 677 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 TMEM79Q9BSE2 394 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 OSGEPL1Q9H4B0 414 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 COQ10BQ9H8M1 238 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 CLK4Q9HAZ1 481 aaKnown RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 HINT3Q9NQE9 182 aaKnown RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 GDAP2Q9NXN4 497 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 COPG2Q9UBF2 871 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 SPASTQ9UBP0 616 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 ARMCX3Q9UH62 379 aaPredicted RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 AMACRQ9UHK6 382 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 PSME2Q9UL46 239 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 NAALAD2Q9Y3Q0 740 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 SRPRBQ9Y5M8 271 aaKnown RBP4.64□□□□□ -1.67
CD44-220ENST00000525688 PCDH11XQ9BZA7 1347 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 PCDH11YQ9BZA8 1340 aa4.64□□□□□ -1.67
CD44-220ENST00000525688 PKD1L3Q7Z443 1732 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 LOC100509620A0A075B734 347 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 GOLGA6L7A0A1B0GV03 622 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 SMIM30A4D0T7 59 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 MS4A18H0YCH9 400 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 SLC33A1O00400 549 aaPredicted RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 POLR2DO15514 142 aaKnown RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 PRAMEF12O95522 483 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 PDGFBP01127 241 aaPredicted RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 ZFYP08048 801 aaPredicted RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 NCF1P14598 390 aaPredicted RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 ETS1P14921 441 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 CD38P28907 300 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 PPP2R1AP30153 589 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 PRKCIP41743 596 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 EPS15P42566 896 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 PRCPP42785 496 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 NME5P56597 212 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 PMP22Q01453 160 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 DPYSQ14117 519 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 GAMTQ14353 236 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 EZH2Q15910 746 aaKnown RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 DPYSL2Q16555 572 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 CCDC142Q17RM4 750 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 LEXMQ3ZCV2 418 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 TDRD12Q587J7 1177 aaKnown RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 TCTE1Q5JU00 501 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 RIPPLY2Q5TAB7 128 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 METTL11BQ5VVY1 283 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 GGNBP1Q5YKI7 109 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 ZNF626Q68DY1 528 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 DPY19L2P1Q6NXN4 242 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 SHC4Q6S5L8 630 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 SLC36A4Q6YBV0 504 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 ARMC9Q7Z3E5 817 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 ADCK2Q7Z695 626 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 ELMOD2Q8IZ81 293 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 SPATA6LQ8N4H0 392 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 MINDY1Q8N5J2 469 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 PI4KAP1Q8N8J0 262 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 IQUBQ8NA54 791 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 BBOF1Q8ND07 529 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 RBM15BQ8NDT2 890 aaKnown RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 ARRDC2Q8TBH0 407 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 NTN5Q8WTR8 489 aaPredicted RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 METTL21AQ8WXB1 218 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 LPAR1Q92633 364 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 THRSPQ92748 146 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 PCGF1Q9BSM1 259 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 THUMPD2Q9BTF0 503 aaKnown RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 CACNG6Q9BXT2 260 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 MOV10L1Q9BXT6 1211 aaKnown RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 PUS3Q9BZE2 481 aaKnown RBP4.63□□□□□ -1.67
CD44-220ENST00000525688 KCNN2Q9H2S1 579 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 RIBC2Q9H4K1 309 aa4.63□□□□□ -1.67
CD44-220ENST00000525688 MAGIXQ9H6Y5 334 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms