RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 LAMA5O15230 3695 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 TMEM150CB9EJG8 249 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 CCNDBP1O95273 360 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 SYF2O95926 243 aaKnown RBP16.09■□□□□ 0.17
SNCA-209ENST00000506244 GP5P40197 560 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 TIAL1Q01085 375 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNCA-209ENST00000506244 ABHD18Q0P651 414 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 TGIF1Q15583 401 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 SF1Q15637 639 aaKnown RBP16.09■□□□□ 0.17
SNCA-209ENST00000506244 CCSMST1Q4G0I0 132 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 C6orf15Q6UXA7 325 aaPredicted RBP16.09■□□□□ 0.17
SNCA-209ENST00000506244 CTAGE3PQ8IX95 158 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 GPR135Q8IZ08 494 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 LMNTD1Q8N9Z9 388 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 ZSCAN1Q8NBB4 408 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 DENND1AQ8TEH3 1009 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 EEF1AKMT1Q8WVE0 214 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 NKD1Q969G9 470 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 POPDC3Q9HBV1 291 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 DMGDHQ9UI17 866 aaKnown RBP16.09■□□□□ 0.17
SNCA-209ENST00000506244 SERTAD3Q9UJW9 196 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 LHX6Q9UPM6 363 aa16.09■□□□□ 0.17
SNCA-209ENST00000506244 ZZEF1O43149 2961 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 SCRG1O75711 98 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 HIST1H2AGP0C0S8 130 aaPredicted RBP16.08■□□□□ 0.16
SNCA-209ENST00000506244 CCNYL3P0C7X3 344 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.16
SNCA-209ENST00000506244 HIST1H2ADP20671 130 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 MAGP20916 626 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 RPA3P35244 121 aaPredicted RBP16.08■□□□□ 0.16
SNCA-209ENST00000506244 PNLIPRP1P54315 467 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 ITGA1P56199 1179 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 GPX6P59796 221 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 CXADRP78310 365 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 POU4F1Q01851 419 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 VAC14Q08AM6 782 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 PWWP2BQ6NUJ5 590 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 CYHR1Q6ZMK1 362 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 CDHR3Q6ZTQ4 885 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 RELL1Q8IUW5 271 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 SYTL1Q8IYJ3 562 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 NKAPQ8N5F7 415 aaKnown RBP16.08■□□□□ 0.16
SNCA-209ENST00000506244 C2orf73Q8N5S3 287 aaPredicted RBP16.08■□□□□ 0.16
SNCA-209ENST00000506244 IFT81Q8WYA0 676 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 HIST1H2AHQ96KK5 128 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 PKP4Q99569 1192 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 RBBP8Q99708 897 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 OLFM1Q99784 485 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 HIST1H2AJQ99878 128 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 H2AFJQ9BTM1 129 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 SLC12A9Q9BXP2 914 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 TRIM54Q9BYV2 358 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 SPRY4Q9C004 299 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 KLHL25Q9H0H3 589 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 PARVBQ9HBI1 364 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 LRRC4CQ9HCJ2 640 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 PCDHB3Q9Y5E6 796 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 PTPRQQ9UMZ3 2332 aa16.08■□□□□ 0.16
SNCA-209ENST00000506244 E7EQ34 232 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 SLC16A8O95907 504 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 ENO2P09104 434 aaPredicted RBP16.07■□□□□ 0.16
SNCA-209ENST00000506244 HBQ1P09105 142 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 SAT1P21673 171 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 CMPK1P30085 196 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 SPRP35270 261 aaPredicted RBP16.07■□□□□ 0.16
SNCA-209ENST00000506244 STAT5AP42229 794 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 AP1S2P56377 157 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 KBTBD12Q3ZCT8 623 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 ZC3H12BQ5HYM0 836 aaKnown RBP16.07■□□□□ 0.16
SNCA-209ENST00000506244 VASH2Q86V25 355 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 IFT20Q8IY31 132 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 GALNT6Q8NCL4 622 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 OR2L3Q8NG85 312 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 FBF1Q8TES7 1133 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 ZUFSPQ96AP4 578 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 PDLIM5Q96HC4 596 aaKnown RBP16.07■□□□□ 0.16
SNCA-209ENST00000506244 CCDC138Q96M89 665 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 MCMBPQ9BTE3 642 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 SLC7A5P2Q9GIP4 190 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 PRORYQ9H606 182 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 GPN2Q9H9Y4 310 aaPredicted RBP16.07■□□□□ 0.16
SNCA-209ENST00000506244 SMYD2Q9NRG4 433 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 UTP6Q9NYH9 597 aaKnown RBP16.07■□□□□ 0.16
SNCA-209ENST00000506244 ANKMY1Q9P2S6 941 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 KLK4Q9Y5K2 254 aa16.07■□□□□ 0.16
SNCA-209ENST00000506244 ZFHX4Q86UP3 3567 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 KRT87PA6NCN2 255 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 CXorf49A8MYA2 514 aaPredicted RBP16.06■□□□□ 0.16
SNCA-209ENST00000506244 TARM1B6A8C7 271 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 K7ENP7 123 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 PRICKLE3O43900 615 aaPredicted RBP16.06■□□□□ 0.16
SNCA-209ENST00000506244 TSPAN12O95859 305 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 ZNF28P17035 718 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 TSTA3Q13630 321 aaPredicted RBP16.06■□□□□ 0.16
SNCA-209ENST00000506244 GRTP1Q5TC63 336 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 INO80CQ6PI98 192 aaPredicted RBP16.06■□□□□ 0.16
SNCA-209ENST00000506244 GPR155Q7Z3F1 870 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 PPM1NQ8N819 430 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 ZNF480Q8WV37 535 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 SNRNP27Q8WVK2 155 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms