RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 VARSP26640 1264 aaKnown RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 TNFRSF8P28908 595 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 PKLRP30613 574 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 CCR7P32248 378 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 PTPN7P35236 360 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 GRIA1P42261 906 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 NSG1P42857 185 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 OR1D4P47884 311 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 LRBAP50851 2863 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 CENPEQ02224 2701 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 AIMP2Q13155 320 aaKnown RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 CYP2A13Q16696 494 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 KCTD19Q17RG1 926 aaPredicted RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 SLC5A12Q1EHB4 618 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 CCSMST1Q4G0I0 132 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 PRAMEF13Q5VWM6 474 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 TLDC1Q6P9B6 456 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 IGFL2Q6UWQ7 119 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 ZNF534Q76KX8 674 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 OVCH1Q7RTY7 1134 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 PRUNE1Q86TP1 453 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 LDB1Q86U70 411 aaPredicted RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 HOOK3Q86VS8 718 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 ZGRF1Q86YA3 2104 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 MCATQ8IVS2 390 aaKnown RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 TBC1D21Q8IYX1 336 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 SLC22A15Q8IZD6 547 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 ZADH2Q8N4Q0 377 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 ST6GALNAC3Q8NDV1 305 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 OR13J1Q8NGT2 312 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 N4BP2L2Q92802 583 aaPredicted RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.61□□□□□ -1.51
GYPB-205ENST00000505583 ZNF778Q96MU6 729 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 IP6K3Q96PC2 410 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 WDR77Q9BQA1 342 aaPredicted RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 NDC1Q9BTX1 674 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 LACRTQ9GZZ8 138 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 VPS37BQ9H9H4 285 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 TXLNGQ9NUQ3 528 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 IRAK4Q9NWZ3 460 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 OR6C2Q9NZP2 312 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 CDC23Q9UJX2 597 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 SRPK3Q9UPE1 567 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 PLCL2Q9UPR0 1127 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 RUVBL2Q9Y230 463 aaKnown RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 OSGIN2Q9Y236 505 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 EFR3BQ9Y2G0 817 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 R3HDM2Q9Y2K5 976 aaKnown RBP5.61□□□□□ -1.51
GYPB-205ENST00000505583 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.61□□□□□ -1.51
GYPB-205ENST00000505583 MAU2Q9Y6X3 613 aa5.61□□□□□ -1.51
GYPB-205ENST00000505583 LOC105369274A0A096LPK9 316 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 LOC102723532A0A0G2JNH3 316 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 A0A1B0GX78 115 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 ARHGAP10A1A4S6 786 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 GRID2IPA4D2P6 1211 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 VSTM2BA6NLU5 285 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 FFAR3O14843 346 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 DSCR3O14972 297 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 GPR42O15529 346 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 CTSVO60911 334 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 GPC4O75487 556 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 IPO13O94829 963 aaKnown RBP5.6□□□□□ -1.51
GYPB-205ENST00000505583 GOT2P00505 430 aaKnown RBP5.6□□□□□ -1.51
GYPB-205ENST00000505583 FTH1P02794 183 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 CELA2AP08217 269 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 TPM1P09493 284 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 CD9P21926 228 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 CTNNA2P26232 953 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 PSMB5P28074 263 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 GRNP28799 593 aaKnown RBP5.6□□□□□ -1.51
GYPB-205ENST00000505583 RAB28P51157 221 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 EFNA3P52797 238 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 SNRPNP63162 240 aaKnown RBP5.6□□□□□ -1.51
GYPB-205ENST00000505583 HSPA14Q0VDF9 509 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 KLF1Q13351 362 aaPredicted RBP5.6□□□□□ -1.51
GYPB-205ENST00000505583 ITIH4Q14624 930 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 ZNF169Q14929 603 aaPredicted RBP5.6□□□□□ -1.51
GYPB-205ENST00000505583 KIR2DS3Q14952 304 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
GYPB-205ENST00000505583 PARP6Q2NL67 630 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 FRMPD2BQ6IN97 320 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 ZNF449Q6P9G9 518 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 PACS1Q6VY07 963 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 LINC00696Q6ZRV3 163 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 ARHGEF18Q6ZSZ5 1173 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 TMTC1Q8IUR5 882 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 CNGA4Q8IV77 575 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 PRSS58Q8IYP2 241 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 OR4N4Q8N0Y3 316 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 SHISA5Q8N114 240 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 KRT222Q8N1A0 295 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 LRRC57Q8N9N7 239 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 OR11G2Q8NGC1 345 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 OR52K1Q8NGK4 314 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 CFAP61Q8NHU2 1237 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 SLC35B2Q8TB61 432 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 DNAJB14Q8TBM8 379 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 PPP4R1Q8TF05 950 aa5.6□□□□□ -1.51
GYPB-205ENST00000505583 STYXQ8WUJ0 223 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms