RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MCRS1Q96EZ8 462 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 FOPNLQ96NB1 174 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 OR2A14Q96R47 310 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 VAT1Q99536 393 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 GATA5Q9BWX5 397 aaPredicted RBP5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 FOXP3Q9BZS1 431 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF518BQ9C0D4 1074 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 RANBP3Q9H6Z4 567 aaPredicted RBP5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 DTLQ9NZJ0 730 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 MTF2Q9Y483 593 aaPredicted RBP5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 HSPB11Q9Y547 144 aa5.66□□□□□ -1.5
SOX2-OT-218ENST00000498731 ATP6AP2A0A1C7CYW4 349 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 MYBPHLA2RUH7 354 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 HMX3A6NHT5 357 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 F8W810 466 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 SEPT4O43236 478 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 PQBP1O60828 265 aaKnown RBP5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 ATP6AP2O75787 350 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 PGLSO95336 258 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 MLYCDO95822 493 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 HMGCRP04035 888 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 ITGAVP06756 1048 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 SBK3P0C264 359 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 IL7P13232 177 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 NPR3P17342 541 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 KDELR1P24390 212 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 FMO3P31513 532 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 GLRBP48167 497 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 ETV1P50549 477 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 TEKQ02763 1124 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 FAPQ12884 760 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF460Q14592 562 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 LAPTM4AQ15012 233 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 PCBP2Q15366 365 aaKnown RBP eCLIP5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 FAM187BQ17R55 369 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 GPAT3Q53EU6 434 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 GLYATQ6IB77 296 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 PKN3Q6P5Z2 889 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 CRTC1Q6UUV9 634 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 CAMK1DQ8IU85 385 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 LACC1Q8IV20 430 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 DMRTC2Q8IXT2 367 aaPredicted RBP5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 GPR152Q8TDT2 470 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 HEXDCQ8WVB3 486 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 ST8SIA4Q92187 359 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 SLC7A6Q92536 515 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 FAF2Q96CS3 445 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 CATSPERBQ9H7T0 1116 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 RAB6BQ9NRW1 208 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 EHD3Q9NZN3 535 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 OSGIN1Q9UJX0 560 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 COPS3Q9UNS2 423 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 PTGDR2Q9Y5Y4 395 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 ACTL7AQ9Y615 435 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 HSPE1-MOB4S4R3N1 261 aa5.65□□□□□ -1.5
SOX2-OT-218ENST00000498731 LGALS8O00214 317 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 KRT37O76014 449 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CHRNA1P02708 482 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 HMBSP08397 361 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 USP17L7P0C7H9 530 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CCNYL3P0C7X3 344 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 ACVR2AP27037 513 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 TKTL1P51854 596 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CCL23P55773 120 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 PLIN5Q00G26 463 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 PTP4A2Q12974 167 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 SSPNQ14714 243 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 ARL13AQ5H913 290 aaPredicted RBP5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 ALG1LQ6GMV1 187 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 ZNF544Q6NX49 715 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CORO6Q6QEF8 472 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 OR8H3Q8N146 312 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 PYROXD2Q8N2H3 581 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 SFRP1Q8N474 314 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 FAM86B1Q8N7N1 296 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 B3GALNT2Q8NCR0 500 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 UBASH3BQ8TF42 649 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 RASSF5Q8WWW0 418 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 S100ZQ8WXG8 99 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CDKL2Q92772 493 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 LGALS12Q96DT0 336 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 B3GALT6Q96L58 329 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 RIPOR3Q96MK2 946 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 Q96MT0 163 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 SLC30A3Q99726 388 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 MYOCQ99972 504 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CNPY3Q9BT09 278 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CARS2Q9HA77 564 aaKnown RBP5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 OGDHLQ9ULD0 1010 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 TLR6Q9Y2C9 796 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 GMPPBQ9Y5P6 360 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 TRAV19A0A0A6YYK7 116 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 UPK1AO00322 258 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 IRAK2O43187 625 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 TLR5O60602 858 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 FADS2O95864 444 aaKnown RBP5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 OLFM2O95897 454 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 APRTP07741 180 aa5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 CHRM5P08912 532 aaPredicted RBP5.65□□□□□ -1.51
SOX2-OT-218ENST00000498731 POU2F2P09086 479 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms