RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 VNN3Q9NY84 501 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 LTBP2Q14767 1821 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 HELZP42694 1942 aaKnown RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ELOVL7A1L3X0 281 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 SLC28A1O00337 649 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 GNGT2O14610 69 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 GRM6O15303 877 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 SGTAO43765 313 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 TRMUO75648 421 aaKnown RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ETHE1O95571 254 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ZNF682O95780 498 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ALBP02768 609 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ASLP04424 464 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 HIST1H2AGP0C0S8 130 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 LINC00271P0C7V0 271 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 CYP4B1P13584 511 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 HLA-EP13747 358 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 HIST1H2ADP20671 130 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 IRS1P35568 1242 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 MAPK8P45983 427 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 STT3AP46977 705 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 MRPL19P49406 292 aaKnown RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 MAP7Q14244 749 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 FAM98BQ52LJ0 330 aaKnown RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 GPR107Q5VW38 600 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 TMEM26Q6ZUK4 368 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 FRS2Q8WU20 508 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 PAIP1Q9H074 479 aaKnown RBP12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ADNPQ9H2P0 1102 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 TOR3AQ9H497 397 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 A0A0C4DFX4 3053 aa12.11□□□□□ -0.47
HMGN1-220ENST00000492280 ARHGEF33A8MVX0 844 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 AXIN1O15169 862 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 MAN1A2O60476 641 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 GMNNO75496 209 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PRSS23O95084 383 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 KRT6AP02538 564 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 KRT6BP04259 564 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 RAP2AP10114 183 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 FCGR1AP12314 374 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 EPCAMP16422 314 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 KRT6CP48668 564 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PON2Q15165 354 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 RBBP5Q15291 538 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 CES5AQ6NT32 575 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 FAM180BQ6P0A1 224 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 LILRA6Q6PI73 481 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 DOK6Q6PKX4 331 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 TRIM46Q7Z4K8 759 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PROSER1Q86XN7 944 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 UBTD2Q8WUN7 234 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 ASB11Q8WXH4 323 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 LYSMD1Q96S90 227 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 BDH2Q9BUT1 245 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 SLC8A2Q9UPR5 921 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 LRRK1Q38SD2 2015 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 MTCL1Q9Y4B5 1905 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 ABHD14A-ACY1A0A1B0GW23 586 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 K7ESM1 405 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 YY2O15391 372 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 MITFO75030 526 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 CPSF4O95639 269 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 POP4O95707 220 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 ALPLP05186 524 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PFKLP17858 780 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 AQP1P29972 269 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 S100A3P33764 101 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PFN3P60673 137 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 VAC14Q08AM6 782 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 NAE1Q13564 534 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 GPR141Q7Z602 305 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 C12orf40Q86WS4 652 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 CBARPQ8N350 705 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 C2orf73Q8N5S3 287 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PACRGLQ8N7B6 248 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PAPD5Q8NDF8 572 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 IRF7Q92985 503 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 FAM120BQ96EK7 910 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 REXO4Q9GZR2 422 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 FAM83DQ9H4H8 585 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 KAT8Q9H7Z6 458 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PKD2L2Q9NZM6 624 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 NDUFA13Q9P0J0 144 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 IFT80Q9P2H3 777 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 BTBD3Q9Y2F9 522 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 KCNE1BA0A087WTH5 132 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 SAP18O00422 153 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 HS6ST1O60243 411 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 DEAF1O75398 565 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 E2F6O75461 281 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 RHOP08100 348 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 AGXTP21549 392 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms