RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RAB28P51157 221 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 ODF2Q5BJF6 829 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 KCTD11Q693B1 232 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 ITPRIPL1Q6GPH6 555 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 GFRALQ6UXV0 394 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 PACS1Q6VY07 963 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 VRK3Q8IV63 474 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 BRIX1Q8TDN6 353 aaKnown RBP14.67□□□□□ -0.06
MCF2L-228ENST00000487354 CDKN2AIPNLQ96HQ2 116 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 IL17FQ96PD4 163 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 GBP4Q96PP9 640 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 IFNKQ9P0W0 207 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 CIDEBQ9UHD4 219 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 MAU2Q9Y6X3 613 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 TRGV8A0A0C4DH27 118 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 OR51F1A6NGY5 319 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 APOC4-APOC2K7ER74 178 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 CCL21O00585 134 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 PRICKLE3O43900 615 aaPredicted RBP14.66□□□□□ -0.06
MCF2L-228ENST00000487354 UNC5CO95185 931 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 F10P00742 488 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 APOC2P02655 101 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 PRR35P0CG20 571 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 COX6B1P14854 86 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 ACPPP15309 386 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 FOXN2P32314 431 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 ARG2P78540 354 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 CACNG1Q06432 222 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 GRM7Q14831 915 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 YOD1Q5VVQ6 348 aaPredicted RBP14.66□□□□□ -0.06
MCF2L-228ENST00000487354 ZNF449Q6P9G9 518 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 NLRP9Q7RTR0 991 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 TAS2R42Q7RTR8 314 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 LAPTM4BQ86VI4 370 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 TAX1BP1Q86VP1 789 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 C2orf73Q8N5S3 287 aaPredicted RBP14.66□□□□□ -0.06
MCF2L-228ENST00000487354 CCDC110Q8TBZ0 833 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 STT3BQ8TCJ2 826 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 KRT35Q92764 455 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 HAS2Q92819 552 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 CRB3Q9BUF7 120 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 HEMGNQ9BXL5 484 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 SYNPO2LQ9H987 977 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 CHST11Q9NPF2 352 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 LUC7LQ9NQ29 371 aaKnown RBP14.66□□□□□ -0.06
MCF2L-228ENST00000487354 SMARCAL1Q9NZC9 954 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 ABI3Q9P2A4 366 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 PTGFRNQ9P2B2 879 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 ITGB1BP2Q9UKP3 347 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 AAR2Q9Y312 384 aaKnown RBP14.66□□□□□ -0.06
MCF2L-228ENST00000487354 MRPS2Q9Y399 296 aaKnown RBP14.66□□□□□ -0.06
MCF2L-228ENST00000487354 ALG6Q9Y672 507 aa14.66□□□□□ -0.06
MCF2L-228ENST00000487354 IGLV3-12A0A075B6K2 115 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 TRAV17A0A0B4J275 112 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 H7C0C1 242 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 AKR1B10O60218 316 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 ZGLP1P0C6A0 271 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 PIM1P11309 404 aaPredicted RBP14.65□□□□□ -0.06
MCF2L-228ENST00000487354 NSG1P42857 185 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 ATP5OP48047 213 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 EFNA3P52797 238 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 ITIH4Q14624 930 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 FRMPD2BQ6IN97 320 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 FIGLAQ6QHK4 219 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 RPTNQ6XPR3 784 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 ARHGEF18Q6ZSZ5 1173 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 KBTBD2Q8IY47 623 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 SLC22A15Q8IZD6 547 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 SIRT6Q8N6T7 355 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 ACTL9Q8TC94 416 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 LKAAEAR1Q8TD35 194 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 C10orf90Q96M02 699 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 SPATA13Q96N96 652 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 FAM118BQ9BPY3 351 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 SELENOSQ9BQE4 189 aa14.65□□□□□ -0.06
MCF2L-228ENST00000487354 SUCOQ9UBS9 1254 aaKnown RBP14.65□□□□□ -0.06
MCF2L-228ENST00000487354 MAP2K7O14733 419 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 OR1I1O60431 355 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 USP1O94782 785 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 FTH1P02794 183 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 TPH1P17752 444 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 CD9P21926 228 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 KIR3DL1P43629 444 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 HADHBP55084 474 aaKnown RBP14.64□□□□□ -0.07
MCF2L-228ENST00000487354 PMP22Q01453 160 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 GTF3C1Q12789 2109 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 VWA2Q5GFL6 755 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 TCTE1Q5JU00 501 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 TMEM207Q6UWW9 146 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 SPNS3Q6ZMD2 512 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 CCDC50Q8IVM0 306 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 PRSS58Q8IYP2 241 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 RCOR2Q8IZ40 523 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 ACBD4Q8NC06 268 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 OR8K1Q8NGG5 319 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 DENND1AQ8TEH3 1009 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 NHEJ1Q9H9Q4 299 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-228ENST00000487354 STOX2Q9P2F5 926 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-228ENST00000487354 IMPACTQ9P2X3 320 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 FEZ2Q9UHY8 353 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms