RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 LILRA3Q8N6C8 439 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 CEP112Q8N8E3 955 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 C2CD4AQ8NCU7 369 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 CERS2Q96G23 380 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 FOPNLQ96NB1 174 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 FERD3LQ96RJ6 166 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 MAP3K3Q99759 626 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 RAB11FIP5Q9BXF6 653 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 TRIM31Q9BZY9 425 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 TSPYL1Q9H0U9 437 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 FGF21Q9NSA1 209 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 OR6C2Q9NZP2 312 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 FBXO5Q9UKT4 447 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 CDYLQ9Y232 598 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 ASF1AQ9Y294 204 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 ZNF451Q9Y4E5 1061 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 PCDHGA9Q9Y5G4 932 aaKnown RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 PIKFYVEQ9Y2I7 2098 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 LRRK2Q5S007 2527 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 FLNCQ14315 2725 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CTAGE15A4D2H0 777 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 TLCD2A6NGC4 264 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 GOLGA8KD6RF30 607 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 E5RI56 91 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 GOLGA8TH3BQL2 631 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 DPM1O60762 260 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SCRG1O75711 98 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 FKBP9O95302 570 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 DDAH2O95865 285 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CTAGE8P0CG41 777 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CBSLP0DN79 551 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 ENO3P13929 434 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CHRM3P20309 590 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 FMO4P31512 558 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CBSP35520 551 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SLC1A2P43004 574 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 PREPP48147 710 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 PDIA2Q13087 525 aaKnown RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 GBX1Q14549 363 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CTSL3PQ5NE16 218 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 DNTTIP2Q5QJE6 756 aaKnown RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 JMJD6Q6NYC1 403 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 UNC5AQ6ZN44 842 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 MAMDC2Q7Z304 686 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CTAGE6Q86UF2 777 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SLC26A11Q86WA9 606 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 AMIGO1Q86WK6 493 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 TMEM126BQ8IUX1 230 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 DCUN1D3Q8IWE4 304 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CTAGE4Q8IX94 777 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 RAB42Q8N4Z0 105 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 ZBTB2Q8N680 514 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 FDCSPQ8NFU4 85 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 LCN9Q8WX39 176 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 ZNF592Q92610 1267 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SLC41A2Q96JW4 573 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SLC29A3Q9BZD2 475 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CHST8Q9H2A9 424 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SRMSQ9H3Y6 488 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SYTL2Q9HCH5 934 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 MLXIPLQ9NP71 852 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 HRASLS2Q9NWW9 162 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 MOCS1Q9NZB8 636 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 GRHL1Q9NZI5 618 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 G3BP2Q9UN86 482 aaKnown RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 SNX7Q9UNH6 387 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CRYL1Q9Y2S2 319 aa9.66□□□□□ -0.86
CPSF4-213ENST00000484112 CFAP20Q9Y6A4 193 aaKnown RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 USP9YO00507 2555 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-213ENST00000484112 C2orf74A8MZ97 194 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 MAP3K7O43318 606 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 CPNE3O75131 537 aaKnown RBP9.65□□□□□ -0.86
CPSF4-213ENST00000484112 VPS26AO75436 327 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 MATN4O95460 622 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 CLDN1O95832 211 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 KLK3P07288 261 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-213ENST00000484112 MSL3P1P0C860 447 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 DCTP40126 519 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 CLCN7P51798 805 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 MGAT5Q09328 741 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 GPS2Q13227 327 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 CTBP1Q13363 440 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 RAPSNQ13702 412 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 GPR19Q15760 415 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 KCTD19Q17RG1 926 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-213ENST00000484112 FAM69BQ5VUD6 431 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 DENND6AQ8IWF6 608 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 ZBED8Q8IZ13 594 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 FBXO36Q8NEA4 188 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 OR52E1Q8NGJ3 308 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 PYROXD1Q8WU10 500 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 NAT14Q8WUY8 206 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 CDKL2Q92772 493 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 INPP5DQ92835 1189 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 RAD51AP1Q96B01 352 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 SLC22A18Q96BI1 424 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 C19orf60Q96EN9 201 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 FCRL4Q96PJ5 515 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms