RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 P3H4Q92791 437 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 MAGED4Q96JG8 741 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 SELENOSQ9BQE4 189 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 APOL2Q9BQE5 337 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 PACSIN1Q9BY11 444 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 GPAMQ9HCL2 828 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 ZNF304Q9HCX3 659 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
NDC1-202ENST00000480952 INTS7Q9NVH2 962 aaKnown RBP12.78□□□□□ -0.36
NDC1-202ENST00000480952 ZNF282Q9UDV7 671 aaPredicted RBP12.78□□□□□ -0.36
NDC1-202ENST00000480952 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 PRAMEF2O60811 474 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 AP2A2O94973 939 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 BMP10O95393 424 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 SERPINC1P01008 464 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 CXCR2P25025 360 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 ZBED6P86452 979 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 LRRC38Q5VT99 294 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 RANBP10Q6VN20 620 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 DTWD1Q8N5C7 304 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 C2orf73Q8N5S3 287 aaPredicted RBP12.77□□□□□ -0.37
NDC1-202ENST00000480952 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
NDC1-202ENST00000480952 ELMO1Q92556 727 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 LUC7LQ9NQ29 371 aaKnown RBP12.77□□□□□ -0.37
NDC1-202ENST00000480952 DDX56Q9NY93 547 aaKnown RBP12.77□□□□□ -0.37
NDC1-202ENST00000480952 PCNX1Q96RV3 2341 aa12.77□□□□□ -0.37
NDC1-202ENST00000480952 HYKKA2RU49 373 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 FANCGO15287 622 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 WISP2O76076 250 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 COX6A1P12074 109 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 ZNF140P52738 457 aaPredicted RBP12.76□□□□□ -0.37
NDC1-202ENST00000480952 ART1P52961 327 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 CSNK1G2P78368 415 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 PMP22Q01453 160 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 OLIG2Q13516 323 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 SF1Q15637 639 aaKnown RBP12.76□□□□□ -0.37
NDC1-202ENST00000480952 SYTL3Q4VX76 610 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 HIBCHQ6NVY1 386 aaPredicted RBP12.76□□□□□ -0.37
NDC1-202ENST00000480952 FIGLAQ6QHK4 219 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 MEX3BQ6ZN04 569 aaKnown RBP12.76□□□□□ -0.37
NDC1-202ENST00000480952 ARHGEF18Q6ZSZ5 1173 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 TMTC1Q8IUR5 882 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 SLC35G2Q8TBE7 412 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 STMN3Q9NZ72 180 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 NENFQ9UMX5 172 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 MEMO1Q9Y316 297 aa12.76□□□□□ -0.37
NDC1-202ENST00000480952 NIPBLQ6KC79 2804 aaeCLIP12.76□□□□□ -0.37
NDC1-202ENST00000480952 FITM1A5D6W6 292 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 OR5H15A6NDH6 313 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 FAM227AF5H4B4 570 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 SRPX2O60687 465 aaPredicted RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 FTH1P02794 183 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 CELA2AP08217 269 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 PRSS56P0CW18 603 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 CD99P14209 185 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 HOXB4P17483 251 aaPredicted RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 PKLRP30613 574 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 ADRA1AP35348 466 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 ANP32AP39687 249 aaKnown RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 CDKN2BP42772 138 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 EMP2P54851 167 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 VSX2P58304 361 aaPredicted RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 PLOD1Q02809 727 aaPredicted RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 EEF1A2Q05639 463 aaKnown RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 TYRO3Q06418 890 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 WASHC2DQ5SRD0 308 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 ABHD17BQ5VST6 288 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 NUP210LQ5VU65 1888 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 ITPRIPL1Q6GPH6 555 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 PRMT9Q6P2P2 845 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 NAPRTQ6XQN6 538 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 RIPOR1Q6ZS17 1223 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 LAPTM4BQ86VI4 370 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 TAX1BP1Q86VP1 789 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 SPPL2CQ8IUH8 684 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 NAV3Q8IVL0 2385 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 ZNF285Q96NJ3 590 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 C19orf43Q9BQ61 176 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 YIPF2Q9BWQ6 316 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 RNF32Q9H0A6 362 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 GBA3Q9H227 469 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 CAPN11Q9UMQ6 739 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 AAR2Q9Y312 384 aaKnown RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 LUC7L2Q9Y383 392 aaKnown RBP12.75□□□□□ -0.37
NDC1-202ENST00000480952 PRSS21Q9Y6M0 314 aa12.75□□□□□ -0.37
NDC1-202ENST00000480952 DNHD1Q96M86 4753 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 IGHV1-45A0A0A0MS14 117 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 TRBV5-4A0A0C4DH59 114 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 HACD1B0YJ81 288 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 QSOX1O00391 747 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 MLYCDO95822 493 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 S1PR4O95977 384 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 CD9P21926 228 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 AP2B1P63010 937 aa12.74□□□□□ -0.37
NDC1-202ENST00000480952 ZNF33BQ06732 778 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms