RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SIRT6Q8N6T7 355 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 BRIX1Q8TDN6 353 aaKnown RBP9.19□□□□□ -0.94
MCF2L-223ENST00000473345 N4BP2L2Q92802 583 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-223ENST00000473345 C10orf90Q96M02 699 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 ZNF778Q96MU6 729 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 TBL1YQ9BQ87 522 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 C17orf62Q9BQA9 187 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 NDC1Q9BTX1 674 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 WDR54Q9H977 334 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 ENAMQ9NRM1 1142 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 SMARCAL1Q9NZC9 954 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 OR6C2Q9NZP2 312 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 SLC2A6Q9UGQ3 507 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 SH3BGRL2Q9UJC5 107 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 RUVBL2Q9Y230 463 aaKnown RBP9.19□□□□□ -0.94
MCF2L-223ENST00000473345 R3HDM2Q9Y2K5 976 aaKnown RBP9.19□□□□□ -0.94
MCF2L-223ENST00000473345 NF1P21359 2839 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 A0A1B0GUH1 482 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 A0A1W2PPV9 198 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 FITM1A5D6W6 292 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 GOLGA6L6A8MZA4 724 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 HACD1B0YJ81 288 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 CFAP99D6REC4 459 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 H7C0C1 242 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 LIN7AO14910 233 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 KCNN4O15554 427 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 SPOPO43791 374 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 AKR1B10O60218 316 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 UNC5CO95185 931 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 AP2A1O95782 977 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 IGHEP01854 428 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ALBP02768 609 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 PRR35P0CG20 571 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 RALBP11234 206 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 SLC1A1P43005 524 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ATP5OP48047 213 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 GDF10P55107 478 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 POU6F1Q14863 301 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 KIR2DS3Q14952 304 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 RBBP7Q16576 425 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ZXDCQ2QGD7 858 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 GPR33Q49SQ1 333 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 CCDC38Q502W7 563 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 FIGLAQ6QHK4 219 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 FAM180AQ6UWF9 173 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 BNC2Q6ZN30 1099 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ZNF534Q76KX8 674 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 MRGPRGQ86SM5 289 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 LDB1Q86U70 411 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 RHOT2Q8IXI1 618 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ARHGEF39Q8N4T4 335 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 TAB3Q8N5C8 712 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 BCORP1Q8N888 145 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 OR8K1Q8NGG5 319 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 OR13J1Q8NGT2 312 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 STT3BQ8TCJ2 826 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ADAMTS18Q8TE60 1221 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 DENND1AQ8TEH3 1009 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ELMO1Q92556 727 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 MAGEB10Q96LZ2 347 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 SPATA13Q96N96 652 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 LMF1Q96S06 567 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 ABHD10Q9NUJ1 306 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 IRAK4Q9NWZ3 460 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 PTGFRNQ9P2B2 879 aa9.18□□□□□ -0.94
MCF2L-223ENST00000473345 MRPS2Q9Y399 296 aaKnown RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 KLF2Q9Y5W3 355 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-223ENST00000473345 TRGV8A0A0C4DH27 118 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 A0A0U1RQJ8 604 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 MROH6A6NGR9 719 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 CCL21O00585 134 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 MAN1A2O60476 641 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 ANXA9O76027 345 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 ZRANB2O95218 330 aaKnown RBP eCLIP9.17□□□□□ -0.94
MCF2L-223ENST00000473345 CRTAMO95727 393 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 WDPCPO95876 746 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 HPP00738 406 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 APOC2P02655 101 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 ZGLP1P0C6A0 271 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 ITGAMP11215 1152 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 CD9P21926 228 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 GRIA1P42261 906 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 CA7P43166 264 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 VSX2P58304 361 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-223ENST00000473345 EEF1A2Q05639 463 aaKnown RBP9.17□□□□□ -0.94
MCF2L-223ENST00000473345 CACNG1Q06432 222 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 TRIM14Q14142 442 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 FASTKQ14296 549 aaKnown RBP9.17□□□□□ -0.94
MCF2L-223ENST00000473345 C3AR1Q16581 482 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 KCTD19Q17RG1 926 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-223ENST00000473345 WASHC2DQ5SRD0 308 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 FAAH2Q6GMR7 532 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 GFRALQ6UXV0 394 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 PACS1Q6VY07 963 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 BZW1Q7L1Q6 419 aaKnown RBP9.17□□□□□ -0.94
MCF2L-223ENST00000473345 CHERPQ8IWX8 916 aaKnown RBP9.17□□□□□ -0.94
MCF2L-223ENST00000473345 SLC22A15Q8IZD6 547 aa9.17□□□□□ -0.94
MCF2L-223ENST00000473345 KRT222Q8N1A0 295 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms