RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 NAGLUP54802 743 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 GYS2P54840 703 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 HERVK_113P63132 956 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 YBX1P67809 324 aaKnown RBP10.89□□□□□ -0.67
SREBF1-209ENST00000470247 SUZ12Q15022 739 aaKnown RBP10.89□□□□□ -0.67
SREBF1-209ENST00000470247 NR0B2Q15466 257 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 LIPMQ5VYY2 423 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 GUSBP11Q6P575 273 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 SUSD1Q6UWL2 747 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 ZCCHC23Q6ZST2 131 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 AMIGO1Q86WK6 493 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 LSMEM2Q8N112 164 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 TCAIMQ8N3R3 496 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 ARFGAP2Q8N6H7 521 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 AVL9Q8NBF6 648 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 BAHD1Q8TBE0 780 aaPredicted RBP10.89□□□□□ -0.67
SREBF1-209ENST00000470247 ZNF483Q8TF39 744 aaPredicted RBP10.89□□□□□ -0.67
SREBF1-209ENST00000470247 CKAP2Q8WWK9 683 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 LCN9Q8WX39 176 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 ATL1Q8WXF7 558 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 SH3KBP1Q96B97 665 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 CCDC126Q96EE4 140 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 PAIP2Q9BPZ3 127 aaKnown RBP10.89□□□□□ -0.67
SREBF1-209ENST00000470247 ERVK-6Q9BXR3 956 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 C20orf27Q9GZN8 174 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 GSTO2Q9H4Y5 243 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 SLC32A1Q9H598 525 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 ZNF395Q9H8N7 513 aaPredicted RBP10.89□□□□□ -0.67
SREBF1-209ENST00000470247 WWOXQ9NZC7 414 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 OR6C2Q9NZP2 312 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 LRIT1Q9P2V4 623 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 LNPEPQ9UIQ6 1025 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 PCTPQ9UKL6 214 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 SH2B3Q9UQQ2 575 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 SLC22A14Q9Y267 594 aa10.89□□□□□ -0.67
SREBF1-209ENST00000470247 PTPRZ1P23471 2315 aaPredicted RBP10.89□□□□□ -0.67
SREBF1-209ENST00000470247 A0A1B0GTL3 188 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 FAM221BA6H8Z2 402 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 K7EPI3 171 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 FLRT2O43155 660 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 ITM2AO43736 263 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 SH3BP5O60239 455 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 CHRM5P08912 532 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 CKMT1AP12532 417 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 PNLIPP16233 465 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 SHMT2P34897 504 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 MDH1P40925 334 aaKnown RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 GRK6P43250 576 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 GPR3P46089 330 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 CDH13P55290 713 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 OR1D5P58170 312 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 TBPL1P62380 186 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 GUCY1A3Q02108 690 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 CFHR1Q03591 330 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 CHI3L2Q15782 390 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 PDK4Q16654 411 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 PERM1Q5SV97 790 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 METTL2BQ6P1Q9 378 aaKnown RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 THOC6Q86W42 341 aaKnown RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 SYTL1Q8IYJ3 562 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 OR2A1Q8NGT9 310 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 RHBDD1Q8TEB9 315 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 SMPDL3AQ92484 453 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 ZNF75CPQ92670 426 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 RSC1A1Q92681 617 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 RAB11FIP5Q9BXF6 653 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 SRMSQ9H3Y6 488 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 ZNF225Q9UK10 706 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 TNPO3Q9Y5L0 923 aaKnown RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 ZFHX2Q9C0A1 2572 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-209ENST00000470247 PCNX2A6NKB5 2137 aa10.88□□□□□ -0.67
SREBF1-209ENST00000470247 IGHV1OR21-1A0A087WYE8 117 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 OR6C74A6NCV1 312 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 OR5K3A6NET4 321 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 RHPN2P1A8MT19 583 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 UBFD1O14562 309 aaKnown RBP10.87□□□□□ -0.67
SREBF1-209ENST00000470247 OR7A17O14581 309 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 SUPT7LO94864 414 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 WDR47O94967 919 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 S100BP04271 92 aaPredicted RBP10.87□□□□□ -0.67
SREBF1-209ENST00000470247 SERPINE1P05121 402 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 TYRP1P17643 537 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 TSPAN8P19075 237 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 POLR2CP19387 275 aaPredicted RBP10.87□□□□□ -0.67
SREBF1-209ENST00000470247 PSMB5P28074 263 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 CD1CP29017 333 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 PRDX3P30048 256 aaKnown RBP10.87□□□□□ -0.67
SREBF1-209ENST00000470247 LSSP48449 732 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 EPHA4P54764 986 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 PPP1CAP62136 330 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 CLCQ05315 142 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 PCDH1Q08174 1060 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 BST1Q10588 318 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 GTF2H2Q13888 395 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 PLCL1Q15111 1095 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 AASDHQ4L235 1098 aaPredicted RBP10.87□□□□□ -0.67
SREBF1-209ENST00000470247 STPG1Q5TH74 334 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 FAM219BQ5XKK7 198 aa10.87□□□□□ -0.67
SREBF1-209ENST00000470247 CAPN13Q6MZZ7 669 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms