RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 Q6ZPB1 254 aaPredicted RBP5.65□□□□□ -1.5
NCL-208ENST00000466274 ZDHHC17Q8IUH5 632 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 GPR135Q8IZ08 494 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 UBR7Q8N806 425 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 SLC38A9Q8NBW4 561 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 OR2Y1Q8NGV0 311 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 OR14K1Q8NGZ2 314 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 EXD1Q8NHP7 514 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 ZNF669Q96BR6 464 aaPredicted RBP5.65□□□□□ -1.5
NCL-208ENST00000466274 ZNF501Q96CX3 271 aaPredicted RBP5.65□□□□□ -1.5
NCL-208ENST00000466274 CXorf40BQ96DE9 158 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 EXOC2Q96KP1 924 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 NT5C1BQ96P26 610 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 ZSWIM1Q9BR11 485 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 BTBD2Q9BX70 525 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 BLZF1Q9H2G9 400 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 SYNCQ9H7C4 482 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 ACTR5Q9H9F9 607 aaPredicted RBP5.65□□□□□ -1.5
NCL-208ENST00000466274 KCNJ16Q9NPI9 418 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 TMEM248Q9NWD8 314 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 PLA2G3Q9NZ20 509 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 VPS18Q9P253 973 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 UBA2Q9UBT2 640 aaPredicted RBP5.65□□□□□ -1.5
NCL-208ENST00000466274 NDOR1Q9UHB4 597 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 SERTAD3Q9UJW9 196 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 COQ4Q9Y3A0 265 aa5.65□□□□□ -1.5
NCL-208ENST00000466274 PTRH2Q9Y3E5 179 aaKnown RBP5.65□□□□□ -1.5
NCL-208ENST00000466274 MORC2Q9Y6X9 1032 aaPredicted RBP5.65□□□□□ -1.5
NCL-208ENST00000466274 ABCA4P78363 2273 aa5.65□□□□□ -1.51
NCL-208ENST00000466274 ZNF469Q96JG9 3925 aaPredicted RBP5.65□□□□□ -1.51
NCL-208ENST00000466274 MAP1AP78559 2803 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 FAM237BA0A1B0GVD1 139 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 CCDC78A2IDD5 438 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 CCDC66A2RUB6 948 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 INAFM1C9JVW0 142 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 E9PLN8 166 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 SOCS6O14544 535 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 PDPK1O15530 556 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 CTAG2O75638 210 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 KLF7O75840 302 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 SLCO2B1O94956 709 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 HEXIM1O94992 359 aaKnown RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 ZRANB2O95218 330 aaKnown RBP eCLIP5.64□□□□□ -1.51
NCL-208ENST00000466274 TSPAN12O95859 305 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 RAF1P04049 648 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 MMEP08473 750 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 GM2AP17900 193 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 YBEYP58557 167 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 SUMO1P63165 101 aaKnown RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 SLC6A3Q01959 620 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 RUNX1T1Q06455 604 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 LRMPQ12912 555 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 SLC25A52Q3SY17 297 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 DCAF17Q5H9S7 520 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 KANK2Q63ZY3 851 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 HMBOX1Q6NT76 420 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 ARMC6Q6NXE6 501 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 NAPRTQ6XQN6 538 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 TRIM72Q6ZMU5 477 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 C16orf47Q6ZP98 133 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 LINC00696Q6ZRV3 163 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 B4GALNT4Q76KP1 1039 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 SLC26A9Q7LBE3 791 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 SRLQ86TD4 932 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 PAQR7Q86WK9 346 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 PPM1KQ8N3J5 372 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 TTC30BQ8N4P2 665 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 AOPEPQ8N6M6 819 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 KIAA0895Q8NCT3 520 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 C1orf131Q8NDD1 294 aaKnown RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 CATSPER1Q8NEC5 780 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 ZNF397Q8NF99 534 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 THAP3Q8WTV1 239 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 NEU4Q8WWR8 484 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 RSC1A1Q92681 617 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 CCDC47Q96A33 483 aaKnown RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 AP2M1Q96CW1 435 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 ECHDC3Q96DC8 303 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 TAAR6Q96RI8 345 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 NPY6RQ99463 290 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 MAP3K3Q99759 626 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 VKORC1Q9BQB6 163 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 OSGEPL1Q9H4B0 414 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 GPATCH2LQ9NWQ4 482 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 SOHLH2Q9NX45 425 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 B4GALT6Q9UBX8 382 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 OR12D3Q9UGF7 316 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 FBXL4Q9UKA2 621 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 ADAM21Q9UKJ8 722 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 ZNF835Q9Y2P0 537 aa5.64□□□□□ -1.51
NCL-208ENST00000466274 MRPS2Q9Y399 296 aaKnown RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 NSD1Q96L73 2696 aaPredicted RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 NYNRINQ9P2P1 1898 aaKnown RBP5.64□□□□□ -1.51
NCL-208ENST00000466274 A0A0G2JNJ9 132 aa5.63□□□□□ -1.51
NCL-208ENST00000466274 C17orf113A0A1B0GUU1 675 aa5.63□□□□□ -1.51
NCL-208ENST00000466274 TRIM49BA6NDI0 452 aa5.63□□□□□ -1.51
NCL-208ENST00000466274 PDZK1P1A8MUH7 402 aa5.63□□□□□ -1.51
NCL-208ENST00000466274 E7EQ34 232 aa5.63□□□□□ -1.51
NCL-208ENST00000466274 CETN3O15182 167 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms