RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZFYVE1Q9HBF4 777 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 BPIFA1Q9NP55 256 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 SUSD2Q9UGT4 822 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 LEF1Q9UJU2 399 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-207ENST00000463477 PPIL1Q9Y3C6 166 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 OARD1Q9Y530 152 aa9.67□□□□□ -0.86
PTPRD-207ENST00000463477 DMXL1Q9Y485 3027 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 LAMA1P25391 3075 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 PATE3B3GLJ2 98 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 TXNDC9O14530 226 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 PLRG1O43660 514 aaKnown RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 SLC22A3O75751 556 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 IGSF6O95976 241 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 S100BP04271 92 aaPredicted RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 GPIP06744 558 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 SMIM18P0DKX4 95 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 UMPSP11172 480 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 PCSK2P16519 638 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 DGKAP23743 735 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 CCR5P51681 352 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 METAP1P53582 386 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 ADPRHP54922 357 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 EMX2Q04743 252 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 CNTN1Q12860 1018 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 NFATC2Q13469 925 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 INPP5AQ14642 412 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 ADRM1Q16186 407 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 RBBP7Q16576 425 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 MYLK3Q32MK0 819 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 VPS26BQ4G0F5 336 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 TRIM61Q5EBN2 209 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 C6orf136Q5SQH8 315 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 ATXN7L2Q5T6C5 722 aaPredicted RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 INTS11Q5TA45 600 aaKnown RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 AGBL4Q5VU57 503 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 KIAA0895LQ68EN5 471 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 PPP4R4Q6NUP7 873 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 NEK5Q6P3R8 708 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 ERMP1Q7Z2K6 904 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 SERPINA9Q86WD7 417 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 TMEM125Q96AQ2 219 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 EME1Q96AY2 570 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 PPP1R16AQ96I34 528 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 HDAC8Q9BY41 377 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 CPEB1Q9BZB8 566 aaKnown RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 TM6SF2Q9BZW4 377 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 SMOC1Q9H4F8 434 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 ATP13A3Q9H7F0 1226 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 RDH14Q9HBH5 336 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 CAPN10Q9HC96 672 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 CMTM6Q9NX76 183 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 DLL3Q9NYJ7 618 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 EIF2B4Q9UI10 523 aaKnown RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 PTBP2Q9UKA9 531 aaKnown RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 CNOT6Q9ULM6 557 aaKnown RBP9.66□□□□□ -0.86
PTPRD-207ENST00000463477 SLC6A14Q9UN76 642 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 BTRCQ9Y297 605 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 PTGDR2Q9Y5Y4 395 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 CACNA1EQ15878 2313 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 DNAH14Q0VDD8 3507 aa9.66□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3DA0A087WVF3 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3IA0A087WXS9 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3EA0A087X179 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3KA0A087X1G2 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 A0A1B0GTW7 788 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 A0A1W2PQ67 120 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3FA6NER0 549 aaPredicted RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3LB9A6J9 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 KPNA3O00505 521 aaPredicted RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 GDF9O60383 454 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 WDR47O94967 919 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 OR4F21O95013 312 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 PRAMEF1O95521 474 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 OTCP00480 354 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 IGHV4-34P06331 123 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ENO2P09104 434 aaPredicted RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3HP0C7X1 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 CBSLP0DN79 551 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 FCGR1AP12314 374 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ATP6V1B2P21281 511 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ACRV1P26436 265 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 CD27P26842 260 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 PRDX3P30048 256 aaKnown RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 CBSP35520 551 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 SPAM1P38567 509 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 POLR2JP52435 117 aaKnown RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 LIMK1P53667 647 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 DIO3P55073 304 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ERVPABLB-1P60509 514 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 AASDHQ4L235 1098 aaPredicted RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ATP6AP1LQ52LC2 224 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 PIP5KL1Q5T9C9 394 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3GQ6DHY5 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 PTRHD1Q6GMV3 140 aaKnown RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3CQ6IPX1 549 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TCEAL6Q6IPX3 200 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 LAYNQ6UX15 382 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 Q6ZSR9 355 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 FRA10AC1Q70Z53 315 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms