RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 TMED5Q9Y3A6 229 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 CLCA3PQ9Y6N3 262 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 STON1Q9Y6Q2 735 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 EFCAB10A6NFE3 127 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 LOC730098B7Z3J9 87 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 TIPRLO75663 272 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 SLC18A2Q05940 514 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 TMIGD1Q6UXZ0 262 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 RINLQ6ZS11 566 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 PQLC1Q8N2U9 271 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 FITM2Q8N6M3 262 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 C1orf52Q8N6N3 182 aaKnown RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 ZNF540Q8NDQ6 660 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 OR4F6Q8NGB9 312 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 OR10A6Q8NH74 314 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 GPR151Q8TDV0 419 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 RIT1Q92963 219 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 THUMPD1Q9NXG2 353 aaKnown RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 LZTS1Q9Y250 596 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 KLHL33A6NCF5 533 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 OR5K4A6NMS3 321 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 TRIM24O15164 1050 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 EFNA1P20827 205 aaPredicted RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 LEPRP48357 1165 aaKnown RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 BTN3A2P78410 334 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 BNIP1Q12981 228 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 DSC3Q14574 896 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 TGFBIQ15582 683 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 SLC9B1Q4ZJI4 515 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 KLHL12Q53G59 568 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 NAIF1Q69YI7 327 aaPredicted RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 KIAA1161Q6NSJ0 714 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 TMEM174Q8WUU8 243 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 RACGAP1Q9H0H5 632 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 MANBAO00462 879 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 MFN2O95140 757 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 CCNA2P20248 432 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 MTX3Q5HYI7 312 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 BROXQ5VW32 411 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 CLVS1Q8IUQ0 354 aaPredicted RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 NPWQ8N729 165 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 Q8N9G6 341 aaPredicted RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 MOSPD2Q8NHP6 518 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 CD244Q9BZW8 370 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 ADAP2Q9NPF8 381 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 RAPGEFL1Q9UHV5 662 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 PHF11Q9UIL8 331 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 U3KQV3 271 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 A8MU76 341 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 ZNF217O75362 1048 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 ATP5A1P25705 553 aaKnown RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 FOXN2P32314 431 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 PTCHD4Q6ZW05 846 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 KLF16Q9BXK1 252 aaPredicted RBP13.54□□□□□ -0.24
RPL28-202ENST00000426763 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
RPL28-202ENST00000426763 H3BQ06 376 aaPredicted RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 TNFRSF11BO00300 401 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 KLK3P07288 261 aaPredicted RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 MPC1LP0DKB6 136 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 DRD1P21728 446 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 RANBP1P43487 201 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 EIPR1Q53HC9 387 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 ALKAL1Q6UXT8 129 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 IGDCC3Q8IVU1 814 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 DDHD1Q8NEL9 900 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 DGAT2Q96PD7 388 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 DGCR6LQ9BY27 220 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 PNO1Q9NRX1 252 aaKnown RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 ZCCHC3Q9NUD5 404 aaKnown RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 PLAGL1Q9UM63 463 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 SCML1Q9UN30 329 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 PRORSD1PA6NEY8 169 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 IGLON5A6NGN9 336 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 SLC16A5O15375 505 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 SEC24AO95486 1093 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 GPIP06744 558 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 KLK1P06870 262 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 CHN2P52757 468 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 DCST1Q5T197 706 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 TAPBPLQ9BX59 468 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 CSNK1G1Q9HCP0 422 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 DNAAF2Q9NVR5 837 aaKnown RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 PDP1Q9P0J1 537 aaPredicted RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 SERTAD3Q9UJW9 196 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 EDIL3O43854 480 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 CCKBRP32239 447 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 GDF5P43026 501 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 AFF1P51825 1210 aaKnown RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 CRISP3P54108 245 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 NRG3P56975 720 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 ZNF252P-AS1Q0IIN9 211 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 RAB6CQ53S08 254 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 SFRP1Q8N474 314 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 OR10H5Q8NGA6 315 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
RPL28-202ENST00000426763 RAB6CQ9H0N0 254 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 LINC00597Q9H2U6 94 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 AKTIPQ9H8T0 292 aa13.53□□□□□ -0.24
RPL28-202ENST00000426763 GMFGO60234 142 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms